RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 ZNF716A6NP11 495 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 HSPB2A8KAH6 182 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 VAMP5O95183 116 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 EIF4EP06730 217 aaKnown RBP15.94■□□□□ 0.14
VARS2-206ENST00000473916 OCMP0CE72 109 aaPredicted RBP15.94■□□□□ 0.14
VARS2-206ENST00000473916 EPXP11678 715 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 SNRPBP14678 240 aaKnown RBP15.94■□□□□ 0.14
VARS2-206ENST00000473916 APEX1P27695 318 aaKnown RBP15.94■□□□□ 0.14
VARS2-206ENST00000473916 LHX2P50458 406 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 PLGLB1Q02325 96 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 HSPB2Q16082 182 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 TRIM16LQ309B1 348 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 SLC25A25Q6KCM7 469 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.94■□□□□ 0.14
VARS2-206ENST00000473916 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.94■□□□□ 0.14
VARS2-206ENST00000473916 EGFL6Q8IUX8 553 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 ABTB1Q969K4 478 aaPredicted RBP15.94■□□□□ 0.14
VARS2-206ENST00000473916 TMEM54Q969K7 222 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 ASH2LQ9UBL3 628 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 B4GALT7Q9UBV7 327 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 CLEC4AQ9UMR7 237 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 POLR1DQ9Y2S0 133 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 FLVCR1Q9Y5Y0 555 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 NOTOA8MTQ0 251 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 GLSO94925 669 aaPredicted RBP15.94■□□□□ 0.14
VARS2-206ENST00000473916 ADRA2CP18825 462 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 ANOS1P23352 680 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 CFL1P23528 166 aaKnown RBP15.94■□□□□ 0.14
VARS2-206ENST00000473916 CCL11P51671 97 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 ZNF433Q8N7K0 673 aaPredicted RBP15.94■□□□□ 0.14
VARS2-206ENST00000473916 SAMD12Q8N8I0 201 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 DNAAF1Q8NEP3 725 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 TRMT10AQ8TBZ6 339 aaKnown RBP15.94■□□□□ 0.14
VARS2-206ENST00000473916 HAVCR2Q8TDQ0 301 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 ABHD3Q8WU67 409 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 TMEM106AQ96A25 262 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.94■□□□□ 0.14
VARS2-206ENST00000473916 G6PC2Q9NQR9 355 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 LIPGQ9Y5X9 500 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 R4GMQ9 66 aa15.94■□□□□ 0.14
VARS2-206ENST00000473916 FREM1Q5H8C1 2179 aa15.93■□□□□ 0.14
VARS2-206ENST00000473916 RER1O15258 196 aa15.93■□□□□ 0.14
VARS2-206ENST00000473916 SSX4O60224 188 aa15.93■□□□□ 0.14
VARS2-206ENST00000473916 H2BFMP0C1H6 154 aa15.93■□□□□ 0.14
VARS2-206ENST00000473916 EVX1P49640 407 aa15.93■□□□□ 0.14
VARS2-206ENST00000473916 ARG2P78540 354 aa15.93■□□□□ 0.14
VARS2-206ENST00000473916 C3AR1Q16581 482 aa15.93■□□□□ 0.14
VARS2-206ENST00000473916 HES5Q5TA89 166 aa15.93■□□□□ 0.14
VARS2-206ENST00000473916 ABLIM2Q6H8Q1 611 aa15.93■□□□□ 0.14
VARS2-206ENST00000473916 MZT2AQ6P582 158 aa15.93■□□□□ 0.14
VARS2-206ENST00000473916 IGF2-ASQ6U949 168 aa15.93■□□□□ 0.14
VARS2-206ENST00000473916 POC5Q8NA72 575 aa15.93■□□□□ 0.14
VARS2-206ENST00000473916 FDCSPQ8NFU4 85 aa15.93■□□□□ 0.14
VARS2-206ENST00000473916 FOXD3Q9UJU5 478 aaPredicted RBP15.93■□□□□ 0.14
VARS2-206ENST00000473916 TRBV5-7A0A0A0MS05 114 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 FAM25AB3EWG3 89 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 FAM25CB3EWG5 89 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 FAM25GB3EWG6 89 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 GPR171O14626 319 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 DNPH1O43598 174 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 TLX3O43711 291 aaPredicted RBP15.92■□□□□ 0.14
VARS2-206ENST00000473916 TMCC2O75069 709 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 SPNP16150 400 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 CCR9P51686 369 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 RRADP55042 308 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 CLDN18P56856 261 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 CLN3Q13286 438 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 SGCAQ16586 387 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 RNFT1Q5M7Z0 435 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 ASPHD2Q6ICH7 369 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 STAC2Q6ZMT1 411 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 GPR148Q8TDV2 347 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 TSEN15Q8WW01 171 aaKnown RBP15.92■□□□□ 0.14
VARS2-206ENST00000473916 COX4I2Q96KJ9 171 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 SOSTQ9BQB4 213 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 TBC1D24Q9ULP9 559 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 KLF13Q9Y2Y9 288 aaPredicted RBP15.92■□□□□ 0.14
VARS2-206ENST00000473916 TNRC6AQ8NDV7 1962 aaKnown RBP15.92■□□□□ 0.14
VARS2-206ENST00000473916 BOD1L1Q8NFC6 3051 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 TMEM269A0A1B0GVZ9 245 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 LMX1BO60663 402 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 CLDN12P56749 244 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 PYDC2Q56P42 97 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 LRRTM1Q86UE6 522 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 ACOT12Q8WYK0 555 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 PHYHIPQ92561 330 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 CCDC32Q9BV29 185 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 SF3B5Q9BWJ5 86 aaKnown RBP15.92■□□□□ 0.14
VARS2-206ENST00000473916 ZNF416Q9BWM5 594 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 C1orf198Q9H425 327 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 ZCCHC4Q9H5U6 513 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 PPP1R3EQ9H7J1 279 aa15.92■□□□□ 0.14
VARS2-206ENST00000473916 LINC00854A0A1B0GVQ3 168 aa15.91■□□□□ 0.14
VARS2-206ENST00000473916 MAS1P04201 325 aa15.91■□□□□ 0.14
VARS2-206ENST00000473916 CSF3P09919 207 aa15.91■□□□□ 0.14
VARS2-206ENST00000473916 IL7P13232 177 aa15.91■□□□□ 0.14
VARS2-206ENST00000473916 SOX8P57073 446 aa15.91■□□□□ 0.14
VARS2-206ENST00000473916 PPIAP62937 165 aaKnown RBP15.91■□□□□ 0.14
VARS2-206ENST00000473916 PMP22Q01453 160 aa15.91■□□□□ 0.14
VARS2-206ENST00000473916 TAB1Q15750 504 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms