RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 IQCGQ9H095 443 aaKnown RBP1.87□□□□□ -2.11
CALD1-216ENST00000473714 FBXO44Q9H4M3 255 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 NCOR1P1Q9H4R4 102 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 ISG20L2Q9H9L3 353 aaKnown RBP1.87□□□□□ -2.11
CALD1-216ENST00000473714 NHEJ1Q9H9Q4 299 aaPredicted RBP1.87□□□□□ -2.11
CALD1-216ENST00000473714 DMAP1Q9NPF5 467 aaPredicted RBP1.87□□□□□ -2.11
CALD1-216ENST00000473714 EXOSC3Q9NQT5 275 aaKnown RBP1.87□□□□□ -2.11
CALD1-216ENST00000473714 SAMSN1Q9NSI8 373 aaKnown RBP1.87□□□□□ -2.11
CALD1-216ENST00000473714 CUTCQ9NTM9 273 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 KLHL28Q9NXS3 571 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 IL36GQ9NZH8 169 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 B4GALT7Q9UBV7 327 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 IKZF2Q9UKS7 526 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 PRPF19Q9UMS4 504 aaKnown RBP1.87□□□□□ -2.11
CALD1-216ENST00000473714 RNF24Q9Y225 148 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 PPIAL4AQ9Y536 164 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 TTC41PQ6P2S7 1318 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 STARD9Q9P2P6 4700 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 DNAH10Q8IVF4 4471 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 IGHV5-51A0A0C4DH38 117 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 IQANK1A0A1B0GTG1 560 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 SAGE2PA6NJ88 616 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 ACOD1A6NK06 481 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 RPL37AP8A6NKH3 93 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 CCT8L1PA6NM43 557 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 OR52A4PA6NMU1 304 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 SNTNA6NMZ2 147 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 ZNF716A6NP11 495 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 A8MXQ7 604 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 ZNF487B1APH4 448 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 G3V3Y1 287 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 KIF2AO00139 706 aaPredicted RBP1.86□□□□□ -2.11
CALD1-216ENST00000473714 WRBO00258 174 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 CDC7O00311 574 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 BTN3A3O00478 584 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 DYNC1I1O14576 645 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 CASQ2O14958 399 aaPredicted RBP1.86□□□□□ -2.11
CALD1-216ENST00000473714 TM9SF1O15321 606 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 RS1O15537 224 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 PFKFB2O60825 505 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 SCRG1O75711 98 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 RHBDL1O75783 438 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 AP2A1O95782 977 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 TGM6O95932 706 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 OPN1LWP04000 364 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 WNT2P09544 360 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 CCDC159P0C7I6 412 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 ZNF735P0CB33 412 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 ZNF24P17028 368 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 NELFEP18615 380 aaKnown RBP1.86□□□□□ -2.11
CALD1-216ENST00000473714 GALP22466 123 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 SLC2A5P22732 501 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 WARSP23381 471 aaKnown RBP1.86□□□□□ -2.11
CALD1-216ENST00000473714 PTBP1P26599 531 aaKnown RBP eCLIP1.86□□□□□ -2.11
CALD1-216ENST00000473714 SRP14P37108 136 aaKnown RBP1.86□□□□□ -2.11
CALD1-216ENST00000473714 CCT6AP40227 531 aaKnown RBP1.86□□□□□ -2.11
CALD1-216ENST00000473714 POU3F4P49335 361 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 PKNOX1P55347 436 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 MAP3K7CLP57077 242 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 RGS8P57771 180 aaPredicted RBP1.86□□□□□ -2.11
CALD1-216ENST00000473714 RIPPLY1Q0D2K3 151 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 BST1Q10588 318 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 CALCOCO2Q13137 446 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 SERTAD2Q14140 314 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 PIGHQ14442 188 aaPredicted RBP1.86□□□□□ -2.11
CALD1-216ENST00000473714 KCNJ11Q14654 390 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 SIX1Q15475 284 aaPredicted RBP1.86□□□□□ -2.11
CALD1-216ENST00000473714 TGFBIQ15582 683 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 PPP1R3AQ16821 1122 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 KLHL38Q2WGJ6 581 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 TMEM30BQ3MIR4 351 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 FAM71F2Q6NXP2 309 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 FAHD2BQ6P2I3 314 aaPredicted RBP1.86□□□□□ -2.11
CALD1-216ENST00000473714 RNASEKQ6P5S7 137 aaKnown RBP1.86□□□□□ -2.11
CALD1-216ENST00000473714 CCDC137Q6PK04 289 aaKnown RBP1.86□□□□□ -2.11
CALD1-216ENST00000473714 HSDL2Q6YN16 418 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 C19orf35Q6ZS72 473 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 FAM92BQ6ZTR7 304 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 EIF3MQ7L2H7 374 aaKnown RBP1.86□□□□□ -2.11
CALD1-216ENST00000473714 NRMQ8IXM6 262 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 DAW1Q8N136 415 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 KIR3DL3Q8N743 410 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 C4orf32Q8N8J7 132 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 ZNRF1Q8ND25 227 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 SPATA4Q8NEY3 305 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 CCDC148Q8NFR7 591 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 OR1L4Q8NGR5 311 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 OR2A12Q8NGT7 310 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 KCNG3Q8TAE7 436 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 BRSK1Q8TDC3 778 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 KIFAP3Q92845 792 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 NT5C3BQ969T7 300 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 MCUR1Q96AQ8 359 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 C10orf35Q96D05 121 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 FAHD2AQ96GK7 314 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 SMARCD1Q96GM5 515 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 COQ2Q96H96 371 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 PPP1R16AQ96I34 528 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 LINC00479Q96M42 142 aa1.86□□□□□ -2.11
CALD1-216ENST00000473714 SLC38A2Q96QD8 506 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms