RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 RGS6P49758 472 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 TNFAIP6P98066 277 aaPredicted RBP11.45□□□□□ -0.58
CHD3-209ENST00000473376 PSG7Q13046 419 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 AQP6Q13520 282 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 LRRC23Q53EV4 343 aaPredicted RBP11.45□□□□□ -0.58
CHD3-209ENST00000473376 TMEM255AQ5JRV8 349 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 GPR139Q6DWJ6 353 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 SLC27A4Q6P1M0 643 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 MBOAT2Q6ZWT7 520 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 LRRC28Q86X40 367 aaPredicted RBP11.45□□□□□ -0.58
CHD3-209ENST00000473376 NRMQ8IXM6 262 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 BPIFB2Q8N4F0 458 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 KLHL36Q8N4N3 616 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 RP9Q8TA86 221 aaKnown RBP11.45□□□□□ -0.58
CHD3-209ENST00000473376 HAVCR1Q96D42 359 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 TPD52L3Q96J77 140 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 GPX7Q96SL4 187 aaPredicted RBP11.45□□□□□ -0.58
CHD3-209ENST00000473376 GPA33Q99795 319 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 HOPXQ9BPY8 73 aaPredicted RBP11.45□□□□□ -0.58
CHD3-209ENST00000473376 PLA2G12AQ9BZM1 189 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 TMEM106BQ9NUM4 274 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 GRHPRQ9UBQ7 328 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 TMEM5Q9Y2B1 443 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 CACNG2Q9Y698 323 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 TEX13CA0A0J9YWL9 993 aa11.44□□□□□ -0.58
CHD3-209ENST00000473376 XKRYO14609 159 aa11.44□□□□□ -0.58
CHD3-209ENST00000473376 FFAR1O14842 300 aa11.44□□□□□ -0.58
CHD3-209ENST00000473376 SHOX2O60902 331 aaPredicted RBP11.44□□□□□ -0.58
CHD3-209ENST00000473376 PRSS23O95084 383 aa11.44□□□□□ -0.58
CHD3-209ENST00000473376 RAC2P15153 192 aa11.44□□□□□ -0.58
CHD3-209ENST00000473376 GLO1Q04760 184 aa11.44□□□□□ -0.58
CHD3-209ENST00000473376 TOP3AQ13472 1001 aaPredicted RBP11.44□□□□□ -0.58
CHD3-209ENST00000473376 ZBED5Q49AG3 693 aa11.44□□□□□ -0.58
CHD3-209ENST00000473376 SPATA46Q5T0L3 261 aa11.44□□□□□ -0.58
CHD3-209ENST00000473376 ZNF774Q6NX45 483 aa11.44□□□□□ -0.58
CHD3-209ENST00000473376 PGM2L1Q6PCE3 622 aa11.44□□□□□ -0.58
CHD3-209ENST00000473376 CBLL1Q75N03 491 aa11.44□□□□□ -0.58
CHD3-209ENST00000473376 FAM122BQ7Z309 247 aa11.44□□□□□ -0.58
CHD3-209ENST00000473376 MUC20Q8N307 709 aaPredicted RBP11.44□□□□□ -0.58
CHD3-209ENST00000473376 OR5L1Q8NGL2 311 aa11.44□□□□□ -0.58
CHD3-209ENST00000473376 OR51A7Q8NH64 312 aa11.44□□□□□ -0.58
CHD3-209ENST00000473376 GTF3AQ92664 365 aaKnown RBP11.44□□□□□ -0.58
CHD3-209ENST00000473376 DVL3Q92997 716 aaPredicted RBP11.44□□□□□ -0.58
CHD3-209ENST00000473376 PTP4A1Q93096 173 aa11.44□□□□□ -0.58
CHD3-209ENST00000473376 NMNAT1Q9HAN9 279 aaPredicted RBP11.44□□□□□ -0.58
CHD3-209ENST00000473376 PATZ1Q9HBE1 687 aaKnown RBP11.44□□□□□ -0.58
CHD3-209ENST00000473376 IL20RAQ9UHF4 553 aa11.44□□□□□ -0.58
CHD3-209ENST00000473376 PURGQ9UJV8 347 aaKnown RBP11.44□□□□□ -0.58
CHD3-209ENST00000473376 TENM1Q9UKZ4 2725 aa11.44□□□□□ -0.58
CHD3-209ENST00000473376 A0A087WUU8 490 aa11.43□□□□□ -0.58
CHD3-209ENST00000473376 LOC100653049A0A140TA62 436 aa11.43□□□□□ -0.58
CHD3-209ENST00000473376 A0A1W2PRQ8 180 aa11.43□□□□□ -0.58
CHD3-209ENST00000473376 PRSS37A4D1T9 235 aa11.43□□□□□ -0.58
CHD3-209ENST00000473376 SGCEO43556 437 aa11.43□□□□□ -0.58
CHD3-209ENST00000473376 SPRY1O43609 319 aaPredicted RBP11.43□□□□□ -0.58
CHD3-209ENST00000473376 TIMM8AO60220 97 aaPredicted RBP11.43□□□□□ -0.58
CHD3-209ENST00000473376 PIP5K1CO60331 668 aa11.43□□□□□ -0.58
CHD3-209ENST00000473376 KRT34O76011 436 aa11.43□□□□□ -0.58
CHD3-209ENST00000473376 H2AFXP16104 143 aaPredicted RBP11.43□□□□□ -0.58
CHD3-209ENST00000473376 SLC6A9P48067 706 aa11.43□□□□□ -0.58
CHD3-209ENST00000473376 FOXL1Q12952 345 aa11.43□□□□□ -0.58
CHD3-209ENST00000473376 DGCR6Q14129 220 aa11.43□□□□□ -0.58
CHD3-209ENST00000473376 KCNMB1Q16558 191 aa11.43□□□□□ -0.58
CHD3-209ENST00000473376 IFI44LQ53G44 452 aa11.43□□□□□ -0.58
CHD3-209ENST00000473376 RBMS3Q6XE24 437 aaKnown RBP11.43□□□□□ -0.58
CHD3-209ENST00000473376 ZNF730Q6ZMV8 503 aa11.43□□□□□ -0.58
CHD3-209ENST00000473376 DOK3Q7L591 496 aa11.43□□□□□ -0.58
CHD3-209ENST00000473376 RRM2BQ7LG56 351 aa11.43□□□□□ -0.58
CHD3-209ENST00000473376 ADCK1Q86TW2 530 aa11.43□□□□□ -0.58
CHD3-209ENST00000473376 SLC15A3Q8IY34 581 aa11.43□□□□□ -0.58
CHD3-209ENST00000473376 RASD2Q96D21 266 aa11.43□□□□□ -0.58
CHD3-209ENST00000473376 MSL2Q9HCI7 577 aa11.43□□□□□ -0.58
CHD3-209ENST00000473376 NRIP3Q9NQ35 241 aa11.43□□□□□ -0.58
CHD3-209ENST00000473376 DDX28Q9NUL7 540 aaKnown RBP11.43□□□□□ -0.58
CHD3-209ENST00000473376 VSX1Q9NZR4 365 aaPredicted RBP11.43□□□□□ -0.58
CHD3-209ENST00000473376 CAPN7Q9Y6W3 813 aa11.43□□□□□ -0.58
CHD3-209ENST00000473376 TRAV27A0A087WT01 109 aa11.42□□□□□ -0.58
CHD3-209ENST00000473376 A0A1B0GWJ7 208 aa11.42□□□□□ -0.58
CHD3-209ENST00000473376 A0A1W2PPL8 197 aa11.42□□□□□ -0.58
CHD3-209ENST00000473376 ISPDA4D126 451 aa11.42□□□□□ -0.58
CHD3-209ENST00000473376 OR6C6A6NF89 314 aa11.42□□□□□ -0.58
CHD3-209ENST00000473376 F5H0A9 414 aaPredicted RBP11.42□□□□□ -0.58
CHD3-209ENST00000473376 CLDN34H7C241 214 aa11.42□□□□□ -0.58
CHD3-209ENST00000473376 PTP4A3O75365 173 aa11.42□□□□□ -0.58
CHD3-209ENST00000473376 ZNF12P17014 697 aa11.42□□□□□ -0.58
CHD3-209ENST00000473376 SDHAP31040 664 aa11.42□□□□□ -0.58
CHD3-209ENST00000473376 MDH2P40926 338 aaKnown RBP11.42□□□□□ -0.58
CHD3-209ENST00000473376 BTG1P62324 171 aa11.42□□□□□ -0.58
CHD3-209ENST00000473376 GUCY1A3Q02108 690 aa11.42□□□□□ -0.58
CHD3-209ENST00000473376 ZNF154Q13106 437 aa11.42□□□□□ -0.58
CHD3-209ENST00000473376 ZNF181Q2M3W8 571 aa11.42□□□□□ -0.58
CHD3-209ENST00000473376 FBXW12Q6X9E4 464 aa11.42□□□□□ -0.58
CHD3-209ENST00000473376 HACD2Q6Y1H2 254 aa11.42□□□□□ -0.58
CHD3-209ENST00000473376 THSD4Q6ZMP0 1018 aa11.42□□□□□ -0.58
CHD3-209ENST00000473376 VASH1Q7L8A9 365 aaPredicted RBP11.42□□□□□ -0.58
CHD3-209ENST00000473376 CYP4Z1Q86W10 505 aa11.42□□□□□ -0.58
CHD3-209ENST00000473376 GLB1L2Q8IW92 636 aa11.42□□□□□ -0.58
CHD3-209ENST00000473376 CLDN22Q8N7P3 220 aa11.42□□□□□ -0.58
CHD3-209ENST00000473376 ZDHHC22Q8N966 263 aa11.42□□□□□ -0.58
CHD3-209ENST00000473376 DEFB108BQ8NET1 73 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms