RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 STK11Q15831 433 aa12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 MDGA2Q7Z553 956 aa12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 PUSL1Q8N0Z8 303 aaKnown RBP12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 SVBPQ8N300 66 aa12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 METTL27Q8N6F8 245 aaPredicted RBP12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 ACBD4Q8NC06 268 aa12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 SLC37A2Q8TED4 501 aa12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 CASTOR1Q8WTX7 329 aa12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 PRRT1Q99946 306 aa12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 CST11Q9H112 138 aa12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 ARID1BQ8NFD5 2236 aaPredicted RBP12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 EEF1E1-BLOC1S5C9J1V9 151 aa12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 UTS2O95399 124 aa12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 HNRNPA2B1P22626 353 aaKnown RBP12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 CXCR1P25024 350 aa12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 AVPR2P30518 371 aa12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 EIF2B1Q14232 305 aaKnown RBP12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 C1QL3Q5VWW1 255 aa12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 KCTD9Q7L273 389 aa12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 SLC25A42Q86VD7 318 aa12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 FAM174AQ8TBP5 190 aa12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 PHB2Q99623 299 aa12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 MBD2Q9UBB5 411 aa12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 KCNK7Q9Y2U2 307 aa12.81□□□□□ -0.36
NHLRC3-204ENST00000473371 FADS1O60427 444 aa12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 MYOGP15173 224 aa12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 CTAG1AP78358 180 aa12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 IL13RA1P78552 427 aa12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 INPP5JQ15735 1006 aaPredicted RBP12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 GUCA2BQ16661 112 aa12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 TMEM31Q5JXX7 168 aa12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 LDLRAD3Q86YD5 345 aa12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 OR13C3Q8NGS6 347 aa12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 SEMA6CQ9H3T2 930 aa12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 MRPL22Q9NWU5 206 aaKnown RBP12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 ZNF107Q9UII5 783 aaPredicted RBP12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 CLDN16Q9Y5I7 305 aa12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 PRSS37A4D1T9 235 aa12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 IGFBP3P17936 291 aaPredicted RBP12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 VAMP1P23763 118 aa12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 MAOBP27338 520 aa12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 TNFRSF4P43489 277 aa12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 SQSTM1Q13501 440 aa12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 CORO6Q6QEF8 472 aa12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 CATSPERDQ86XM0 798 aa12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 GTPBP8Q8N3Z3 284 aaPredicted RBP12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 ARHGEF39Q8N4T4 335 aa12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 NUDT9Q9BW91 350 aa12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 TCEAL2Q9H3H9 227 aaPredicted RBP12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 TMED7Q9Y3B3 224 aa12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 KLF2Q9Y5W3 355 aaPredicted RBP12.8□□□□□ -0.36
NHLRC3-204ENST00000473371 A0A0A6YYH2 397 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 C9orf170A2RU37 121 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 MEGF11A6BM72 1044 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 A6NJ64 397 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 ZNF98A6NK75 572 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 SCRN3Q0VDG4 424 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 ZNF542PQ5EBM4 170 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 TRAPPC6BQ86SZ2 158 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 FJX1Q86VR8 437 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 FAM160A2Q8N612 972 aaPredicted RBP12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 CHST4Q8NCG5 386 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 PAQR8Q8TEZ7 354 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 RELTQ969Z4 430 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 ADAT1Q9BUB4 502 aaKnown RBP12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 ABHD6Q9BV23 337 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 GMEB2Q9UKD1 530 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 LRP12Q9Y561 859 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 ARPC4-TTLL3A0A0A6YYG9 625 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 A0A1W2PQF6 199 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 KCNAB3O43448 404 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 BGLAPP02818 100 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 PVALBP20472 110 aaPredicted RBP12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 ACKR1Q16570 336 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 CHRDL2Q6WN34 429 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 C19orf47Q8N9M1 422 aaKnown RBP12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 MITD1Q8WV92 249 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 HERVK_113Q902F9 699 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 C8orf44Q96CB5 159 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 HHLA2Q9UM44 414 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 C17orf105B2RV13 164 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 F8W036 122 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 HCRTR2O43614 444 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 KLF8O95600 359 aaPredicted RBP12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 IL33O95760 270 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 NUDT14O95848 222 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 CELA2BP08218 269 aaPredicted RBP12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 HLA-GP17693 338 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 FSTP19883 344 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 RPL27P61353 136 aaKnown RBP12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 BLOC1S1P78537 153 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 ROM1Q03395 351 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 PRR22Q8IZ63 422 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 ARMC10Q8N2F6 343 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 ZSCAN1Q8NBB4 408 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 ZNF784Q8NCA9 323 aaPredicted RBP12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 FOXRED1Q96CU9 486 aaPredicted RBP12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 MMABQ96EY8 250 aaPredicted RBP12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 ADOQ96SZ5 270 aa12.79□□□□□ -0.36
NHLRC3-204ENST00000473371 NXF5Q9H1B4 397 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms