RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 RDH5Q92781 318 aa13.36□□□□□ -0.27
MRPL55-226ENST00000473066 SAMD8Q96LT4 415 aa13.36□□□□□ -0.27
MRPL55-226ENST00000473066 GPA33Q99795 319 aa13.36□□□□□ -0.27
MRPL55-226ENST00000473066 NUAK2Q9H093 628 aa13.36□□□□□ -0.27
MRPL55-226ENST00000473066 REEP1Q9H902 201 aa13.36□□□□□ -0.27
MRPL55-226ENST00000473066 CHODLQ9H9P2 273 aa13.36□□□□□ -0.27
MRPL55-226ENST00000473066 KCNS2Q9ULS6 477 aa13.36□□□□□ -0.27
MRPL55-226ENST00000473066 COA3Q9Y2R0 106 aaPredicted RBP13.36□□□□□ -0.27
MRPL55-226ENST00000473066 LYVE1Q9Y5Y7 322 aa13.36□□□□□ -0.27
MRPL55-226ENST00000473066 NIPBLQ6KC79 2804 aaeCLIP13.36□□□□□ -0.27
MRPL55-226ENST00000473066 ARPC3O15145 178 aa13.35□□□□□ -0.27
MRPL55-226ENST00000473066 CCNB2O95067 398 aa13.35□□□□□ -0.27
MRPL55-226ENST00000473066 HPXP02790 462 aa13.35□□□□□ -0.27
MRPL55-226ENST00000473066 GSTM3P21266 225 aa13.35□□□□□ -0.27
MRPL55-226ENST00000473066 WNT5AP41221 380 aa13.35□□□□□ -0.27
MRPL55-226ENST00000473066 GPR6P46095 362 aaPredicted RBP13.35□□□□□ -0.27
MRPL55-226ENST00000473066 GSSP48637 474 aa13.35□□□□□ -0.27
MRPL55-226ENST00000473066 LSM6P62312 80 aaKnown RBP13.35□□□□□ -0.27
MRPL55-226ENST00000473066 TEKQ02763 1124 aa13.35□□□□□ -0.27
MRPL55-226ENST00000473066 CHRFAM7AQ494W8 412 aa13.35□□□□□ -0.27
MRPL55-226ENST00000473066 ZMAT1Q5H9K5 638 aa13.35□□□□□ -0.27
MRPL55-226ENST00000473066 FAM166AQ6J272 317 aa13.35□□□□□ -0.27
MRPL55-226ENST00000473066 C1orf94Q6P1W5 598 aa13.35□□□□□ -0.27
MRPL55-226ENST00000473066 PGBD2Q6P3X8 592 aa13.35□□□□□ -0.27
MRPL55-226ENST00000473066 ZNF620Q6ZNG0 422 aa13.35□□□□□ -0.27
MRPL55-226ENST00000473066 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.35□□□□□ -0.27
MRPL55-226ENST00000473066 ZNF101Q8IZC7 436 aa13.35□□□□□ -0.27
MRPL55-226ENST00000473066 OR9Q2Q8NGE9 314 aa13.35□□□□□ -0.27
MRPL55-226ENST00000473066 SLC25A40Q8TBP6 338 aa13.35□□□□□ -0.27
MRPL55-226ENST00000473066 BCAS4Q8TDM0 211 aa13.35□□□□□ -0.27
MRPL55-226ENST00000473066 IPCEF1Q8WWN9 437 aaPredicted RBP13.35□□□□□ -0.27
MRPL55-226ENST00000473066 ASB9Q96DX5 294 aa13.35□□□□□ -0.27
MRPL55-226ENST00000473066 C4orf45Q96LM5 186 aa13.35□□□□□ -0.27
MRPL55-226ENST00000473066 SNX18Q96RF0 628 aa13.35□□□□□ -0.27
MRPL55-226ENST00000473066 ASH2LQ9UBL3 628 aa13.35□□□□□ -0.27
MRPL55-226ENST00000473066 CGGBP1Q9UFW8 167 aaPredicted RBP13.35□□□□□ -0.27
MRPL55-226ENST00000473066 CDH10Q9Y6N8 788 aa13.35□□□□□ -0.27
MRPL55-226ENST00000473066 ABCA2Q9BZC7 2435 aa13.35□□□□□ -0.27
MRPL55-226ENST00000473066 TANC2Q9HCD6 1990 aa13.34□□□□□ -0.27
MRPL55-226ENST00000473066 LOC100289279A0A1B0GTE1 492 aa13.34□□□□□ -0.27
MRPL55-226ENST00000473066 TCRBV5S2A0A599 114 aa13.34□□□□□ -0.27
MRPL55-226ENST00000473066 LYNX1G3V0Z9 82 aa13.34□□□□□ -0.27
MRPL55-226ENST00000473066 IDH3BO43837 385 aa13.34□□□□□ -0.27
MRPL55-226ENST00000473066 IGHV3-13P01766 116 aa13.34□□□□□ -0.27
MRPL55-226ENST00000473066 LYNX1P0DP58 116 aa13.34□□□□□ -0.27
MRPL55-226ENST00000473066 CDKN2AP42771 156 aaKnown RBP13.34□□□□□ -0.27
MRPL55-226ENST00000473066 MAGEA2P43356 314 aa13.34□□□□□ -0.27
MRPL55-226ENST00000473066 SLC36A3Q495N2 470 aa13.34□□□□□ -0.27
MRPL55-226ENST00000473066 TRPM8Q7Z2W7 1104 aa13.34□□□□□ -0.27
MRPL55-226ENST00000473066 OR4K13Q8NH42 304 aa13.34□□□□□ -0.27
MRPL55-226ENST00000473066 COG8Q96MW5 612 aa13.34□□□□□ -0.27
MRPL55-226ENST00000473066 THTPAQ9BU02 230 aa13.34□□□□□ -0.27
MRPL55-226ENST00000473066 OR2J1Q9GZK6 312 aa13.34□□□□□ -0.27
MRPL55-226ENST00000473066 C1orf21Q9H246 121 aa13.34□□□□□ -0.27
MRPL55-226ENST00000473066 CYSLTR2Q9NS75 346 aa13.34□□□□□ -0.27
MRPL55-226ENST00000473066 DECR2Q9NUI1 292 aa13.34□□□□□ -0.27
MRPL55-226ENST00000473066 TBC1D23Q9NUY8 699 aa13.34□□□□□ -0.27
MRPL55-226ENST00000473066 LPAR3Q9UBY5 353 aa13.34□□□□□ -0.27
MRPL55-226ENST00000473066 CDC42EP3Q9UKI2 254 aa13.34□□□□□ -0.27
MRPL55-226ENST00000473066 SAMHD1Q9Y3Z3 626 aaKnown RBP13.34□□□□□ -0.27
MRPL55-226ENST00000473066 JMJD1CQ15652 2540 aa13.34□□□□□ -0.27
MRPL55-226ENST00000473066 TIMM8AO60220 97 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-226ENST00000473066 LMX1BO60663 402 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 NCR1O76036 304 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 IFNA2P01563 188 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 HLA-DQA2P01906 255 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 SCG5P05408 212 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 TACSTD2P09758 323 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 HIST1H1CP16403 213 aaKnown RBP13.33□□□□□ -0.28
MRPL55-226ENST00000473066 HNF1AP20823 631 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 MAGEB1P43366 347 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 ZNF81P51508 661 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 CCL8P80075 99 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 MRPS11P82912 194 aaKnown RBP13.33□□□□□ -0.28
MRPL55-226ENST00000473066 RIN1Q13671 783 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 DNAL1Q4LDG9 190 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 CLEC12AQ5QGZ9 265 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 ELFN2Q5R3F8 820 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 MBNL2Q5VZF2 373 aaKnown RBP13.33□□□□□ -0.28
MRPL55-226ENST00000473066 OR2T5Q6IEZ7 315 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 VASH1Q7L8A9 365 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-226ENST00000473066 HIPK1Q86Z02 1210 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 SDR9C7Q8NEX9 313 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 OR2T29Q8NH02 315 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 KLF14Q8TD94 323 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-226ENST00000473066 HPS1Q92902 700 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 MARS2Q96GW9 593 aaKnown RBP13.33□□□□□ -0.28
MRPL55-226ENST00000473066 NMNAT3Q96T66 252 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 SHARPINQ9H0F6 387 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 RACGAP1Q9H0H5 632 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 HDHD2Q9H0R4 259 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 SAP30LQ9HAJ7 183 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 SRA1Q9HD15 236 aaKnown RBP13.33□□□□□ -0.28
MRPL55-226ENST00000473066 RPRD1BQ9NQG5 326 aaKnown RBP13.33□□□□□ -0.28
MRPL55-226ENST00000473066 NKIRAS2Q9NYR9 191 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 TAS2R1Q9NYW7 299 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 ATPIF1Q9UII2 106 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 GRIP1Q9Y3R0 1128 aa13.33□□□□□ -0.28
MRPL55-226ENST00000473066 LRP5LA4QPB2 252 aa13.32□□□□□ -0.28
MRPL55-226ENST00000473066 OR6C6A6NF89 314 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms