RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 SOHLH1Q5JUK2 328 aa2.98□□□□□ -1.93
CLK1-209ENST00000472679 SLC8B1Q6J4K2 584 aa2.98□□□□□ -1.93
CLK1-209ENST00000472679 NANOGNBQ7Z5D8 188 aa2.98□□□□□ -1.93
CLK1-209ENST00000472679 ARRDC1Q8N5I2 433 aa2.98□□□□□ -1.93
CLK1-209ENST00000472679 NECAP1Q8NC96 275 aa2.98□□□□□ -1.93
CLK1-209ENST00000472679 PIFOQ8TCI5 191 aa2.98□□□□□ -1.93
CLK1-209ENST00000472679 L3HYPDHQ96EM0 354 aa2.98□□□□□ -1.93
CLK1-209ENST00000472679 RNF5Q99942 180 aa2.98□□□□□ -1.93
CLK1-209ENST00000472679 ILKAPQ9H0C8 392 aaPredicted RBP2.98□□□□□ -1.93
CLK1-209ENST00000472679 PTPRTO14522 1441 aa2.98□□□□□ -1.93
CLK1-209ENST00000472679 YEATS2Q9ULM3 1422 aa2.98□□□□□ -1.93
CLK1-209ENST00000472679 USP47Q96K76 1375 aa2.98□□□□□ -1.93
CLK1-209ENST00000472679 LRRIQ3A6PVS8 624 aaPredicted RBP2.97□□□□□ -1.93
CLK1-209ENST00000472679 YIF1AO95070 293 aa2.97□□□□□ -1.93
CLK1-209ENST00000472679 IGKV1-17P01599 117 aa2.97□□□□□ -1.93
CLK1-209ENST00000472679 F2RP25116 425 aa2.97□□□□□ -1.93
CLK1-209ENST00000472679 DCKP27707 260 aa2.97□□□□□ -1.93
CLK1-209ENST00000472679 CSNK1EP49674 416 aaKnown RBP2.97□□□□□ -1.93
CLK1-209ENST00000472679 CDC20Q12834 499 aa2.97□□□□□ -1.93
CLK1-209ENST00000472679 ZNF726P1Q15940 193 aa2.97□□□□□ -1.93
CLK1-209ENST00000472679 ORMDL2Q53FV1 153 aa2.97□□□□□ -1.93
CLK1-209ENST00000472679 NEGR1Q7Z3B1 354 aa2.97□□□□□ -1.93
CLK1-209ENST00000472679 CALHM1Q8IU99 346 aa2.97□□□□□ -1.93
CLK1-209ENST00000472679 METTL13Q8N6R0 699 aa2.97□□□□□ -1.93
CLK1-209ENST00000472679 PKIBQ9C010 78 aa2.97□□□□□ -1.93
CLK1-209ENST00000472679 TMEM9BQ9NQ34 198 aa2.97□□□□□ -1.93
CLK1-209ENST00000472679 KCNE3Q9Y6H6 103 aa2.97□□□□□ -1.93
CLK1-209ENST00000472679 IKBKGQ9Y6K9 419 aa2.97□□□□□ -1.93
CLK1-209ENST00000472679 COL27A1Q8IZC6 1860 aaPredicted RBP2.96□□□□□ -1.93
CLK1-209ENST00000472679 SMCO2A6NFE2 343 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 L7N2F9 121 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 MPHOSPH10O00566 681 aaKnown RBP2.96□□□□□ -1.94
CLK1-209ENST00000472679 KLHL41O60662 606 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 IGLV3-19P01714 112 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 CD3GP09693 182 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 ACSM4P0C7M7 580 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 DTYMKP23919 212 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 SSTR5P35346 364 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 OPRK1P41145 380 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 ATP5IP56385 69 aaPredicted RBP2.96□□□□□ -1.94
CLK1-209ENST00000472679 SF3A2Q15428 464 aaKnown RBP2.96□□□□□ -1.94
CLK1-209ENST00000472679 PPP1R7Q15435 360 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 OR7A5Q15622 319 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 MRPL23Q16540 153 aaKnown RBP2.96□□□□□ -1.94
CLK1-209ENST00000472679 PRSS8Q16651 343 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 PPM1LQ5SGD2 360 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 MYOCDQ8IZQ8 938 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 OR4K5Q8NGD3 323 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 OR10AD1Q8NGE0 317 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 OR2A1Q8NGT9 310 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 CIRBP-AS1Q8TBR5 109 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 ACMSDQ8TDX5 336 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 NTAN1Q96AB6 310 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 FLYWCH2Q96CP2 140 aaKnown RBP2.96□□□□□ -1.94
CLK1-209ENST00000472679 GALNT14Q96FL9 552 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 TIMM17AQ99595 171 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 ULBP2Q9BZM5 246 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 DDX19AQ9NUU7 478 aaKnown RBP2.96□□□□□ -1.94
CLK1-209ENST00000472679 HPCAL4Q9UM19 191 aa2.96□□□□□ -1.94
CLK1-209ENST00000472679 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.96□□□□□ -1.94
CLK1-209ENST00000472679 AKNAQ7Z591 1439 aa2.95□□□□□ -1.94
CLK1-209ENST00000472679 DENND4AQ7Z401 1863 aa2.95□□□□□ -1.94
CLK1-209ENST00000472679 HEATR9A2RTY3 570 aa2.95□□□□□ -1.94
CLK1-209ENST00000472679 K7EM74 188 aa2.95□□□□□ -1.94
CLK1-209ENST00000472679 CLOCKO15516 846 aa2.95□□□□□ -1.94
CLK1-209ENST00000472679 RRP8O43159 456 aaKnown RBP2.95□□□□□ -1.94
CLK1-209ENST00000472679 CCNE2O96020 404 aa2.95□□□□□ -1.94
CLK1-209ENST00000472679 IGHDP01880 384 aa2.95□□□□□ -1.94
CLK1-209ENST00000472679 ZNF806P0C7X5 589 aa2.95□□□□□ -1.94
CLK1-209ENST00000472679 POLR2MP0CAP2 368 aa2.95□□□□□ -1.94
CLK1-209ENST00000472679 ZNF24P17028 368 aa2.95□□□□□ -1.94
CLK1-209ENST00000472679 FOXN2P32314 431 aa2.95□□□□□ -1.94
CLK1-209ENST00000472679 UBE2NP61088 152 aaKnown RBP2.95□□□□□ -1.94
CLK1-209ENST00000472679 CHRNA6Q15825 494 aa2.95□□□□□ -1.94
CLK1-209ENST00000472679 XKR7Q5GH72 579 aa2.95□□□□□ -1.94
CLK1-209ENST00000472679 CERS6Q6ZMG9 384 aa2.95□□□□□ -1.94
CLK1-209ENST00000472679 TPD52L3Q96J77 140 aa2.95□□□□□ -1.94
CLK1-209ENST00000472679 CAMK2N2Q96S95 79 aa2.95□□□□□ -1.94
CLK1-209ENST00000472679 CENPKQ9BS16 269 aa2.95□□□□□ -1.94
CLK1-209ENST00000472679 OR52D1Q9H346 318 aa2.95□□□□□ -1.94
CLK1-209ENST00000472679 SAMSN1Q9NSI8 373 aaKnown RBP2.95□□□□□ -1.94
CLK1-209ENST00000472679 SYNJ2BP-COX16A0A087WUM0 186 aa2.94□□□□□ -1.94
CLK1-209ENST00000472679 XKRY2A2RUG3 117 aa2.94□□□□□ -1.94
CLK1-209ENST00000472679 ZNF716A6NP11 495 aa2.94□□□□□ -1.94
CLK1-209ENST00000472679 BPY2O14599 106 aa2.94□□□□□ -1.94
CLK1-209ENST00000472679 AIM2O14862 343 aa2.94□□□□□ -1.94
CLK1-209ENST00000472679 OR2J3O76001 311 aa2.94□□□□□ -1.94
CLK1-209ENST00000472679 EIF4EP06730 217 aaKnown RBP2.94□□□□□ -1.94
CLK1-209ENST00000472679 ZNF735P0CB33 412 aa2.94□□□□□ -1.94
CLK1-209ENST00000472679 WARSP23381 471 aaKnown RBP2.94□□□□□ -1.94
CLK1-209ENST00000472679 CDH6P55285 790 aa2.94□□□□□ -1.94
CLK1-209ENST00000472679 PRMT2P55345 433 aa2.94□□□□□ -1.94
CLK1-209ENST00000472679 ZNF816Q0VGE8 651 aaPredicted RBP2.94□□□□□ -1.94
CLK1-209ENST00000472679 BHLHA15Q7RTS1 189 aaPredicted RBP2.94□□□□□ -1.94
CLK1-209ENST00000472679 OR7G2Q8NG99 324 aa2.94□□□□□ -1.94
CLK1-209ENST00000472679 OR56B2PQ8NGI1 322 aa2.94□□□□□ -1.94
CLK1-209ENST00000472679 OR6N1Q8NGY5 312 aa2.94□□□□□ -1.94
CLK1-209ENST00000472679 ZNF488Q96MN9 340 aa2.94□□□□□ -1.94
CLK1-209ENST00000472679 OSBPL11Q9BXB4 747 aa2.94□□□□□ -1.94
CLK1-209ENST00000472679 ANKRA2Q9H9E1 313 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 681.2 ms