RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 CDH16O75309 829 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 AQP8O94778 261 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 SLC25A14O95258 325 aaPredicted RBP2.26□□□□□ -2.05
PTCD3-209ENST00000472044 ACSM4P0C7M7 580 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 MYL2P10916 166 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 MRPL19P49406 292 aaKnown RBP2.26□□□□□ -2.05
PTCD3-209ENST00000472044 CSNK1EP49674 416 aaKnown RBP2.26□□□□□ -2.05
PTCD3-209ENST00000472044 RND2P52198 227 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 PRRX1P54821 245 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 RAP1AP62834 184 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 LIPEQ05469 1076 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 QPRTQ15274 297 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 ALKBH6Q3KRA9 238 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 PTPN20Q4JDL3 420 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 LINC00483Q53H64 154 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 UBE2UQ5VVX9 321 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 DNAJC24Q6P3W2 148 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 TTC23LQ6PF05 361 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 NTM-AS1Q6ZSK4 140 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 NCCRP1Q6ZVX7 275 aaPredicted RBP2.26□□□□□ -2.05
PTCD3-209ENST00000472044 CMC1Q7Z7K0 106 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 CMTM1Q8IZ96 169 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 OR5B3Q8NH48 314 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 FAM81AQ8TBF8 368 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 C8orf44Q96CB5 159 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 TM4SF18Q96CE8 201 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 KRTAP4-3Q9BYR4 195 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 GEMIN7Q9H840 131 aaKnown RBP2.26□□□□□ -2.05
PTCD3-209ENST00000472044 ZNF430Q9H8G1 570 aaPredicted RBP2.26□□□□□ -2.05
PTCD3-209ENST00000472044 HMG20AQ9NP66 347 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 ZNF222Q9UK12 451 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 SLC17A4Q9Y2C5 497 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 SLIT3O75094 1523 aa2.26□□□□□ -2.05
PTCD3-209ENST00000472044 COL4A4P53420 1690 aaPredicted RBP2.25□□□□□ -2.05
PTCD3-209ENST00000472044 IGSF9BQ9UPX0 1349 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 COL27A1Q8IZC6 1860 aaPredicted RBP2.25□□□□□ -2.05
PTCD3-209ENST00000472044 IGLV1-36A0A0B4J1U3 117 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 A0A1W2PP18 115 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 SGK1O00141 431 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 HUS1O60921 280 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 FKBP6O75344 327 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 MRPL3P09001 348 aaKnown RBP2.25□□□□□ -2.05
PTCD3-209ENST00000472044 ATF6P18850 670 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 SYKP43405 635 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 RAB9AP51151 201 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 SP4Q02446 784 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 LOXL1Q08397 574 aaPredicted RBP2.25□□□□□ -2.05
PTCD3-209ENST00000472044 IRF4Q15306 451 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 RGNQ15493 299 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 C5orf47Q569G3 176 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 CEMP1Q6PRD7 247 aaPredicted RBP2.25□□□□□ -2.05
PTCD3-209ENST00000472044 TMEM220Q6QAJ8 160 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 NPSR1Q6W5P4 371 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 LUZP2Q86TE4 346 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 ZNF695Q8IW36 515 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 UBALD2Q8IYN6 164 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 NPWQ8N729 165 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 OR2L8Q8NGY9 312 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 PDXPQ96GD0 296 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 OR5B12Q96R08 314 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 PANX1Q96RD7 426 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 VPS37BQ9H9H4 285 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 NTN4Q9HB63 628 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 TMEM9BQ9NQ34 198 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 LYARQ9NX58 379 aaKnown RBP2.25□□□□□ -2.05
PTCD3-209ENST00000472044 ZNRD1Q9P1U0 126 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 OPN4Q9UHM6 478 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 YTHDF2Q9Y5A9 579 aaKnown RBP2.25□□□□□ -2.05
PTCD3-209ENST00000472044 TMEM14AQ9Y6G1 99 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 PTPRTO14522 1441 aa2.25□□□□□ -2.05
PTCD3-209ENST00000472044 TUBGCP6Q96RT7 1819 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 A0A0U1RQV1 116 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 ZNF705GA8MUZ8 300 aaPredicted RBP2.24□□□□□ -2.05
PTCD3-209ENST00000472044 LSM1O15116 133 aaKnown RBP2.24□□□□□ -2.05
PTCD3-209ENST00000472044 EIF3HO15372 352 aaKnown RBP eCLIP2.24□□□□□ -2.05
PTCD3-209ENST00000472044 B4GALT5O43286 388 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 TCN2P20062 427 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 GTF2E2P29084 291 aaKnown RBP2.24□□□□□ -2.05
PTCD3-209ENST00000472044 VSX2P58304 361 aaPredicted RBP2.24□□□□□ -2.05
PTCD3-209ENST00000472044 SYCNQ0VAF6 134 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 MERTKQ12866 999 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 CHRFAM7AQ494W8 412 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 XKR4Q5GH76 650 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 METTL21CQ5VZV1 264 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 NANOGP8Q6NSW7 305 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 PLET1Q6UQ28 207 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 BHLHA15Q7RTS1 189 aaPredicted RBP2.24□□□□□ -2.05
PTCD3-209ENST00000472044 SSX9Q7RTT3 188 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 WDR86Q86TI4 376 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 PRSS58Q8IYP2 241 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 LYPD6BQ8NI32 183 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 C15orf40Q8WUR7 153 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 CAPSLQ8WWF8 208 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 NRGNQ92686 78 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 NTAN1Q96AB6 310 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 ANKRD60Q9BZ19 345 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 EXO5Q9H790 373 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 C12orf10Q9HB07 376 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 ZNF355PQ9NSJ1 428 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 GCNT4Q9P109 453 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms