RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 ADH4P08319 380 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 IGLL1P15814 213 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 CD33P20138 364 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 LAP3P28838 519 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 IL12AP29459 219 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 HTR5AP47898 357 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 SRP9P49458 86 aaKnown RBP5.7□□□□□ -1.5
HDAC1-204ENST00000471488 ERFP50548 548 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 HOXA4Q00056 320 aaPredicted RBP5.7□□□□□ -1.5
HDAC1-204ENST00000471488 GUCY1A3Q02108 690 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 OR8B8Q15620 311 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 ARSJQ5FYB0 599 aaPredicted RBP5.7□□□□□ -1.5
HDAC1-204ENST00000471488 WDR25Q64LD2 544 aaPredicted RBP5.7□□□□□ -1.5
HDAC1-204ENST00000471488 SFRP4Q6FHJ7 346 aaPredicted RBP5.7□□□□□ -1.5
HDAC1-204ENST00000471488 COMTD1Q86VU5 262 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 KRT73Q86Y46 540 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 C1orf87Q8N0U7 546 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 CNPY4Q8N129 248 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 MNS1Q8NEH6 495 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 VANGL1Q8TAA9 524 aaPredicted RBP5.7□□□□□ -1.5
HDAC1-204ENST00000471488 BBS10Q8TAM1 723 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 ANP32BQ92688 251 aaKnown RBP5.7□□□□□ -1.5
HDAC1-204ENST00000471488 VPS33AQ96AX1 596 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 CLPTM1LQ96KA5 538 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 MEGF10Q96KG7 1140 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 TBX15Q96SF7 602 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 OR2H1Q9GZK4 316 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 WNT5BQ9H1J7 359 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 MMP28Q9H239 520 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 C16orf95Q9H693 158 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 SIAEQ9HAT2 523 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 TAS2R5Q9NYW4 299 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 ERVK-18Q9QC07 812 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 VPREB3Q9UKI3 123 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 TMCC3Q9ULS5 477 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 USH1CQ9Y6N9 552 aa5.7□□□□□ -1.5
HDAC1-204ENST00000471488 A0A0B4J2E0 115 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 A0A1B0GX12 115 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 M0R3H8 397 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 PHYHO14832 338 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 ADAM20O43506 726 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 MGRN1O60291 552 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 DOK2O60496 412 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 TRMUO75648 421 aaKnown RBP5.69□□□□□ -1.5
HDAC1-204ENST00000471488 HLA-DPB1P04440 258 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 FBP1P09467 338 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 ACADSP16219 412 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 EEF1B2P24534 225 aaKnown RBP5.69□□□□□ -1.5
HDAC1-204ENST00000471488 PRKAR1BP31321 381 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 TGFBR2P37173 567 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 PRSS12P56730 875 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 PCBD1P61457 104 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 POU4F2Q12837 409 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 ZNF74Q16587 644 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 WHAMMP3Q1A5X7 153 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 ZNF404Q494X3 552 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 CD276Q5ZPR3 534 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 OR2T2Q6IF00 324 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 VMO1Q7Z5L0 202 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 SLC30A8Q8IWU4 369 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 GALNT4Q8N4A0 578 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 LSMEM1Q8N8F7 131 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 PNLDC1Q8NA58 520 aaKnown RBP5.69□□□□□ -1.5
HDAC1-204ENST00000471488 SMYD1Q8NB12 490 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 NPEPL1Q8NDH3 523 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 OR4C13Q8NGP0 309 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 OR11L1Q8NGX0 322 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 OR6S1Q8NH40 331 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 OR2T6Q8NHC8 308 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 AENQ8WTP8 325 aaKnown RBP5.69□□□□□ -1.5
HDAC1-204ENST00000471488 ST8SIA4Q92187 359 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 SLC7A6Q92536 515 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 C16orf45Q96MC5 204 aaPredicted RBP5.69□□□□□ -1.5
HDAC1-204ENST00000471488 ZNF582Q96NG8 517 aaPredicted RBP5.69□□□□□ -1.5
HDAC1-204ENST00000471488 MCHR1Q99705 422 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 SPATA5L1Q9BVQ7 753 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 CENPHQ9H3R5 247 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 RAD21L1Q9H4I0 556 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 RMND5AQ9H871 391 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 WDR76Q9H967 626 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 A4GALTQ9NPC4 353 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 SIRT7Q9NRC8 400 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 MKS1Q9NXB0 559 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 THUMPD1Q9NXG2 353 aaKnown RBP5.69□□□□□ -1.5
HDAC1-204ENST00000471488 PRDM4Q9UKN5 801 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 SLC7A7Q9UM01 511 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 STARD10Q9Y365 291 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 CAB39Q9Y376 341 aaPredicted RBP5.69□□□□□ -1.5
HDAC1-204ENST00000471488 TIMM10BQ9Y5J6 103 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 DOCK11Q5JSL3 2073 aa5.69□□□□□ -1.5
HDAC1-204ENST00000471488 IGKV1D-43A0A0B4J1Z2 117 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 MEIOCA2RUB1 952 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 H3BSA7 217 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 H3BUX3 64 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 K7EIL1 84 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 IFNL4K9M1U5 179 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 CLIC1O00299 241 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 OR10H3O60404 316 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 TPST2O60704 377 aa5.68□□□□□ -1.5
HDAC1-204ENST00000471488 SLC22A3O75751 556 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms