RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 SLC7A6Q92536 515 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 PPP1R14AQ96A00 147 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 S100PBPQ96BU1 408 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 NR1H4Q96RI1 486 aaPredicted RBP8.6□□□□□ -1.03
SF3A1-207ENST00000471342 PRRG3Q9BZD7 231 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 OR2H1Q9GZK4 316 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 ASH2LQ9UBL3 628 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.6□□□□□ -1.03
SF3A1-207ENST00000471342 SLC5A6Q9Y289 635 aa8.6□□□□□ -1.03
SF3A1-207ENST00000471342 RPL36Q9Y3U8 105 aaKnown RBP8.6□□□□□ -1.03
SF3A1-207ENST00000471342 NBPF19A0A087WUL8 3843 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 BAHCC1Q9P281 2608 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 TENM4Q6N022 2769 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 A0A1W2PPL8 197 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 A0A1W2PPR1 153 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 A0A1W2PR80 420 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 C12orf71A8MTZ7 269 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 PTGES3LE9PB15 166 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 ICMTO60725 284 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 FAM20BO75063 409 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 RAD51DO75771 328 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 DBHP09172 617 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 OR2T7P0C7T2 308 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 NPR2P20594 1047 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 PAICSP22234 425 aaKnown RBP8.59□□□□□ -1.03
SF3A1-207ENST00000471342 CENPAP49450 140 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 PER3P56645 1201 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 OR12D2P58182 307 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 NANOS3P60323 173 aaKnown RBP8.59□□□□□ -1.03
SF3A1-207ENST00000471342 GABARAPL2P60520 117 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 CSNK2BP67870 215 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 TNK1Q13470 666 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 SNTB1Q13884 538 aaKnown RBP8.59□□□□□ -1.03
SF3A1-207ENST00000471342 GALEQ14376 348 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 SGCAQ16586 387 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 SLC25A35Q3KQZ1 300 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 AHSA2Q719I0 299 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 PRSS48Q7RTY5 328 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 DCXRQ7Z4W1 244 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 LHFPL3Q86UP9 236 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 MDP1Q86V88 176 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 ERI1Q8IV48 349 aaKnown RBP8.59□□□□□ -1.03
SF3A1-207ENST00000471342 LRRC18Q8N456 261 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 FAM169BQ8N8A8 192 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 IL17RDQ8NFM7 739 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 OR6K6Q8NGW6 343 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 OR2T27Q8NH04 317 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 AKR7LQ8NHP1 331 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 OTULINQ96BN8 352 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 PELI1Q96FA3 418 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 MS4A3Q96HJ5 214 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 PLEKHA8Q96JA3 519 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 POM121L2Q96KW2 1035 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 WFIKKN1Q96NZ8 548 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 OR8B4Q96RC9 309 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 INTS14Q96SY0 518 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 COPS4Q9BT78 406 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 SOX7Q9BT81 388 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 NDEL1Q9GZM8 345 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 OR10A4Q9H209 315 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 RERGLQ9H628 205 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 ELOVL5Q9NYP7 299 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 UPB1Q9UBR1 384 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 ST6GALNAC2Q9UJ37 374 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 FBXL3Q9UKT7 428 aa8.59□□□□□ -1.03
SF3A1-207ENST00000471342 SF3B6Q9Y3B4 125 aaKnown RBP8.59□□□□□ -1.03
SF3A1-207ENST00000471342 IGHV1-18A0A0C4DH31 117 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 EFCAB10A6NFE3 127 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 PSMD9O00233 223 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 DVL2O14641 736 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 AGFG2O95081 481 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 CLDN1O95832 211 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 LCKP06239 509 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 OR8G3PP0DMU2 310 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 ZNF35P13682 527 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 HOXB1P14653 301 aaPredicted RBP8.58□□□□□ -1.04
SF3A1-207ENST00000471342 DCKP27707 260 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 CALCRP30988 508 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 WNT5AP41221 380 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 ALDH3B2P48448 385 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 ASCL1P50553 236 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 BLVRAP53004 296 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 GP2P55259 537 aaKnown RBP8.58□□□□□ -1.04
SF3A1-207ENST00000471342 SH3BGRP55822 239 aaPredicted RBP8.58□□□□□ -1.04
SF3A1-207ENST00000471342 ADAM8P78325 824 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 PABPC1L2AQ5JQF8 200 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 ZNF774Q6NX45 483 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 FDX2Q6P4F2 183 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 ZNF773Q6PK81 442 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 ZNF322Q6U7Q0 402 aaPredicted RBP8.58□□□□□ -1.04
SF3A1-207ENST00000471342 Q6ZSR3 168 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 RHOUQ7L0Q8 258 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 BHLHA15Q7RTS1 189 aaPredicted RBP8.58□□□□□ -1.04
SF3A1-207ENST00000471342 DMRTC2Q8IXT2 367 aaPredicted RBP8.58□□□□□ -1.04
SF3A1-207ENST00000471342 PRSS35Q8N3Z0 413 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 C17orf78Q8N4C9 275 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 ZNF808Q8N4W9 903 aaPredicted RBP8.58□□□□□ -1.04
SF3A1-207ENST00000471342 ZNF540Q8NDQ6 660 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 OR6N2Q8NGY6 317 aa8.58□□□□□ -1.04
SF3A1-207ENST00000471342 OR52N5Q8NH56 324 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms