RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 SGK2Q9HBY8 427 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 SLC35D1Q9NTN3 355 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 FAM49BQ9NUQ9 324 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 BICRAQ9NZM4 1560 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 ADAM28Q9UKQ2 775 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 PIGLQ9Y2B2 252 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 CBY1Q9Y3M2 126 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 SAMHD1Q9Y3Z3 626 aaKnown RBP0.51□□□□□ -2.33
UBXN4-207ENST00000471246 SZT2Q5T011 3432 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 NBEAL2Q6ZNJ1 2754 aa0.51□□□□□ -2.33
UBXN4-207ENST00000471246 NCOR1O75376 2440 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 NAV3Q8IVL0 2385 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 KDM6BO15054 1643 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 AHDC1Q5TGY3 1603 aaPredicted RBP0.5□□□□□ -2.33
UBXN4-207ENST00000471246 REV3LO60673 3130 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 C5orf63A6NC05 138 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 GOLGA8SH3BPF8 625 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 J3QKU1 62 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 J3QRE1 110 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 CHST10O43529 356 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 DPM1O60762 260 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 IGLV3-25P01717 112 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 CD3GP09693 182 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 ZNF688P0C7X2 276 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 CCNB1P14635 433 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 EPS15P42566 896 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 ACAA2P42765 397 aaKnown RBP0.5□□□□□ -2.33
UBXN4-207ENST00000471246 MAGEA8P43361 318 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 PRMT2P55345 433 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 TAS2R31P59538 309 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 UBE2NP61088 152 aaKnown RBP0.5□□□□□ -2.33
UBXN4-207ENST00000471246 ACTG2P63267 376 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 CCNA1P78396 465 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 CRADDP78560 199 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 CDK5Q00535 292 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 MXD1Q05195 221 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 PRKCDQ05655 676 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 FGL1Q08830 312 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 ELP6Q0PNE2 266 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 CDH17Q12864 832 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 PPIL2Q13356 520 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 FAM53BQ14153 422 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 ZNF235Q14590 738 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 ZNF77Q15935 545 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 EXOC3L2Q2M3D2 409 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 KRTAP21-3Q3LHN1 58 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 RNASE13Q5GAN3 156 aaKnown RBP0.5□□□□□ -2.33
UBXN4-207ENST00000471246 AVPI1Q5T686 147 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 STUMQ69YW2 141 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 SMARCD3Q6STE5 483 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 C16orf47Q6ZP98 133 aaPredicted RBP0.5□□□□□ -2.33
UBXN4-207ENST00000471246 LRRC74BQ6ZQY2 392 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 ADM2Q7Z4H4 148 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 ZNF101Q8IZC7 436 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 TMEM256Q8N2U0 113 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 METTL13Q8N6R0 699 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 TTLQ8NG68 377 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 PHOSPHO2Q8TCD6 241 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 SCFD1Q8WVM8 642 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 THRSPQ92748 146 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 DTNBP1Q96EV8 351 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 WDR34Q96EX3 536 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 GALNT14Q96FL9 552 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 IP6K3Q96PC2 410 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 ZNF317Q96PQ6 595 aaPredicted RBP0.5□□□□□ -2.33
UBXN4-207ENST00000471246 FMO2Q99518 471 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 FGF23Q9GZV9 251 aaPredicted RBP0.5□□□□□ -2.33
UBXN4-207ENST00000471246 ZSCAN16Q9H4T2 348 aaPredicted RBP0.5□□□□□ -2.33
UBXN4-207ENST00000471246 ANKRD19PQ9H560 264 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 RMND5AQ9H871 391 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 KCNJ16Q9NPI9 418 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 HYOU1Q9Y4L1 999 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 PEX16Q9Y5Y5 336 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 MAP1BP46821 2468 aaKnown RBP0.5□□□□□ -2.33
UBXN4-207ENST00000471246 MUC2Q02817 5179 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 UBR5O95071 2799 aaPredicted RBP0.5□□□□□ -2.33
UBXN4-207ENST00000471246 ITPR1Q14643 2758 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 STAB1Q9NY15 2570 aa0.5□□□□□ -2.33
UBXN4-207ENST00000471246 FN1P02751 2386 aaKnown RBP0.49□□□□□ -2.33
UBXN4-207ENST00000471246 ARHGEF11O15085 1522 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 MED14O60244 1454 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 TENM1Q9UKZ4 2725 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 DOCK6Q96HP0 2047 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 IGSF10Q6WRI0 2623 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 TICRRQ7Z2Z1 1910 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 TRAV26-1A0A087WT03 109 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 IGHV7-4-1A0A0J9YVY3 117 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 ZNF816-ZNF321PA0A0X1KG74 233 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 A0A1W2PPV9 198 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 OR6C74A6NCV1 312 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 FAM47DPA6NHR8 397 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 K7EPI3 171 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 DYNC1I1O14576 645 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 PSTPIP1O43586 416 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 SMPD2O60906 423 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 REM1O75628 298 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 H6PDO95479 791 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 FGGP02679 453 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 OR5H8P0DN80 308 aa0.49□□□□□ -2.33
UBXN4-207ENST00000471246 HSPA5P11021 654 aaKnown RBP0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms