RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 LYPD4Q6UWN0 246 aa17.05■□□□□ 0.32
HDAC7-220ENST00000471235 OR51L1Q8NGJ5 315 aa17.05■□□□□ 0.32
HDAC7-220ENST00000471235 OR1J2Q8NGS2 313 aa17.05■□□□□ 0.32
HDAC7-220ENST00000471235 POM121L2Q96KW2 1035 aa17.05■□□□□ 0.32
HDAC7-220ENST00000471235 HCAR1Q9BXC0 346 aa17.05■□□□□ 0.32
HDAC7-220ENST00000471235 GRIP2Q9C0E4 1043 aa17.05■□□□□ 0.32
HDAC7-220ENST00000471235 MED20Q9H944 212 aa17.05■□□□□ 0.32
HDAC7-220ENST00000471235 MRPL22Q9NWU5 206 aaKnown RBP17.05■□□□□ 0.32
HDAC7-220ENST00000471235 SGCEO43556 437 aa17.04■□□□□ 0.32
HDAC7-220ENST00000471235 HLA-DQA2P01906 255 aa17.04■□□□□ 0.32
HDAC7-220ENST00000471235 PAX1P15863 534 aa17.04■□□□□ 0.32
HDAC7-220ENST00000471235 ESRRGP62508 458 aa17.04■□□□□ 0.32
HDAC7-220ENST00000471235 MSMPQ1L6U9 139 aa17.04■□□□□ 0.32
HDAC7-220ENST00000471235 VASH1Q7L8A9 365 aaPredicted RBP17.04■□□□□ 0.32
HDAC7-220ENST00000471235 LRRC75A-AS1Q8N1F1 130 aa17.04■□□□□ 0.32
HDAC7-220ENST00000471235 OR10H5Q8NGA6 315 aa17.04■□□□□ 0.32
HDAC7-220ENST00000471235 PERPQ96FX8 193 aa17.04■□□□□ 0.32
HDAC7-220ENST00000471235 CIB1Q99828 191 aa17.04■□□□□ 0.32
HDAC7-220ENST00000471235 GSX2Q9BZM3 304 aa17.04■□□□□ 0.32
HDAC7-220ENST00000471235 ZNF701Q9NV72 531 aaPredicted RBP17.04■□□□□ 0.32
HDAC7-220ENST00000471235 SPEF1Q9Y4P9 236 aa17.04■□□□□ 0.32
HDAC7-220ENST00000471235 TVP23AA6NH52 213 aa17.03■□□□□ 0.32
HDAC7-220ENST00000471235 ANKRD65E5RJM6 399 aa17.03■□□□□ 0.32
HDAC7-220ENST00000471235 HMGN1P05114 100 aa17.03■□□□□ 0.32
HDAC7-220ENST00000471235 OR4A8P0C604 315 aa17.03■□□□□ 0.32
HDAC7-220ENST00000471235 FAM157BP0CG42 384 aa17.03■□□□□ 0.32
HDAC7-220ENST00000471235 GGT2P36268 569 aa17.03■□□□□ 0.32
HDAC7-220ENST00000471235 HTR5AP47898 357 aa17.03■□□□□ 0.32
HDAC7-220ENST00000471235 GDI2P50395 445 aaKnown RBP17.03■□□□□ 0.32
HDAC7-220ENST00000471235 HIST1H3AP68431 136 aa17.03■□□□□ 0.32
HDAC7-220ENST00000471235 PTGES3Q15185 160 aaKnown RBP17.03■□□□□ 0.32
HDAC7-220ENST00000471235 MST1LQ2TV78 715 aa17.03■□□□□ 0.32
HDAC7-220ENST00000471235 CCDC92Q53HC0 331 aaPredicted RBP17.03■□□□□ 0.32
HDAC7-220ENST00000471235 HIST2H3PS2Q5TEC6 136 aa17.03■□□□□ 0.32
HDAC7-220ENST00000471235 CORO6Q6QEF8 472 aa17.03■□□□□ 0.32
HDAC7-220ENST00000471235 HIST2H3AQ71DI3 136 aa17.03■□□□□ 0.32
HDAC7-220ENST00000471235 KRTAP1-3Q8IUG1 177 aa17.03■□□□□ 0.32
HDAC7-220ENST00000471235 LINC00346Q8IVM7 164 aa17.03■□□□□ 0.32
HDAC7-220ENST00000471235 ALDH16A1Q8IZ83 802 aa17.03■□□□□ 0.32
HDAC7-220ENST00000471235 OSBPL10Q9BXB5 764 aa17.03■□□□□ 0.32
HDAC7-220ENST00000471235 CACNG6Q9BXT2 260 aa17.03■□□□□ 0.32
HDAC7-220ENST00000471235 OR51B6Q9H340 312 aa17.03■□□□□ 0.32
HDAC7-220ENST00000471235 HINT3Q9NQE9 182 aaKnown RBP17.03■□□□□ 0.32
HDAC7-220ENST00000471235 PLEK2Q9NYT0 353 aa17.03■□□□□ 0.32
HDAC7-220ENST00000471235 COMMD3-BMI1R4GMX3 469 aa17.03■□□□□ 0.32
HDAC7-220ENST00000471235 C5orf49A4QMS7 147 aa17.02■□□□□ 0.32
HDAC7-220ENST00000471235 RER1O15258 196 aa17.02■□□□□ 0.32
HDAC7-220ENST00000471235 SYNGR3O43761 229 aa17.02■□□□□ 0.32
HDAC7-220ENST00000471235 COX5BP10606 129 aa17.02■□□□□ 0.32
HDAC7-220ENST00000471235 PSKH1P11801 424 aa17.02■□□□□ 0.32
HDAC7-220ENST00000471235 PAICSP22234 425 aaKnown RBP17.02■□□□□ 0.32
HDAC7-220ENST00000471235 CCNOP22674 350 aa17.02■□□□□ 0.32
HDAC7-220ENST00000471235 EPHA2P29317 976 aa17.02■□□□□ 0.32
HDAC7-220ENST00000471235 GLRXP35754 106 aa17.02■□□□□ 0.32
HDAC7-220ENST00000471235 SERPINF1P36955 418 aa17.02■□□□□ 0.32
HDAC7-220ENST00000471235 WNT5AP41221 380 aa17.02■□□□□ 0.32
HDAC7-220ENST00000471235 RPS23P62266 143 aaKnown RBP17.02■□□□□ 0.32
HDAC7-220ENST00000471235 RAB35Q15286 201 aa17.02■□□□□ 0.32
HDAC7-220ENST00000471235 EFNB3Q15768 340 aa17.02■□□□□ 0.32
HDAC7-220ENST00000471235 SWI5Q1ZZU3 235 aa17.02■□□□□ 0.32
HDAC7-220ENST00000471235 LINC01590Q5TEZ4 76 aa17.02■□□□□ 0.32
HDAC7-220ENST00000471235 SLC18B1Q6NT16 456 aa17.02■□□□□ 0.32
HDAC7-220ENST00000471235 CFAP77Q6ZQR2 320 aa17.02■□□□□ 0.32
HDAC7-220ENST00000471235 PQLC1Q8N2U9 271 aa17.02■□□□□ 0.32
HDAC7-220ENST00000471235 STMN2Q93045 179 aa17.02■□□□□ 0.32
HDAC7-220ENST00000471235 OTULINQ96BN8 352 aa17.02■□□□□ 0.32
HDAC7-220ENST00000471235 RBM4BQ9BQ04 359 aaKnown RBP17.02■□□□□ 0.32
HDAC7-220ENST00000471235 KCNG2Q9UJ96 466 aa17.02■□□□□ 0.32
HDAC7-220ENST00000471235 NDRG4Q9ULP0 352 aaKnown RBP17.02■□□□□ 0.32
HDAC7-220ENST00000471235 OR6C6A6NF89 314 aa17.01■□□□□ 0.31
HDAC7-220ENST00000471235 ZAR1LA6NP61 321 aa17.01■□□□□ 0.31
HDAC7-220ENST00000471235 PRR23D1E9PI22 279 aaPredicted RBP17.01■□□□□ 0.31
HDAC7-220ENST00000471235 EI24O14681 340 aa17.01■□□□□ 0.31
HDAC7-220ENST00000471235 PRR23D2P0DMB1 279 aaPredicted RBP17.01■□□□□ 0.31
HDAC7-220ENST00000471235 PCSK6P29122 969 aa17.01■□□□□ 0.31
HDAC7-220ENST00000471235 ADAM8P78325 824 aa17.01■□□□□ 0.31
HDAC7-220ENST00000471235 SLX4IPQ5VYV7 408 aa17.01■□□□□ 0.31
HDAC7-220ENST00000471235 PLBD1Q6P4A8 553 aa17.01■□□□□ 0.31
HDAC7-220ENST00000471235 RFPL4BQ6ZWI9 263 aa17.01■□□□□ 0.31
HDAC7-220ENST00000471235 ZNF101Q8IZC7 436 aa17.01■□□□□ 0.31
HDAC7-220ENST00000471235 ZNF511Q8NB15 262 aa17.01■□□□□ 0.31
HDAC7-220ENST00000471235 OR6K6Q8NGW6 343 aa17.01■□□□□ 0.31
HDAC7-220ENST00000471235 PTP4A1Q93096 173 aa17.01■□□□□ 0.31
HDAC7-220ENST00000471235 PLEKHA8Q96JA3 519 aa17.01■□□□□ 0.31
HDAC7-220ENST00000471235 TEX12Q9BXU0 123 aa17.01■□□□□ 0.31
HDAC7-220ENST00000471235 GABARAPL3Q9BY60 117 aa17.01■□□□□ 0.31
HDAC7-220ENST00000471235 TVP23BQ9NYZ1 205 aa17.01■□□□□ 0.31
HDAC7-220ENST00000471235 CYB5R1Q9UHQ9 305 aa17.01■□□□□ 0.31
HDAC7-220ENST00000471235 ENOPH1Q9UHY7 261 aa17.01■□□□□ 0.31
HDAC7-220ENST00000471235 ATPIF1Q9UII2 106 aa17.01■□□□□ 0.31
HDAC7-220ENST00000471235 GDF2Q9UK05 429 aaPredicted RBP17.01■□□□□ 0.31
HDAC7-220ENST00000471235 CMAHPQ9Y471 501 aa17.01■□□□□ 0.31
HDAC7-220ENST00000471235 M0R129 80 aa17■□□□□ 0.31
HDAC7-220ENST00000471235 ALPLP05186 524 aa17■□□□□ 0.31
HDAC7-220ENST00000471235 ZNF823P16415 610 aa17■□□□□ 0.31
HDAC7-220ENST00000471235 FMO3P31513 532 aa17■□□□□ 0.31
HDAC7-220ENST00000471235 RPS27P42677 84 aaKnown RBP17■□□□□ 0.31
HDAC7-220ENST00000471235 ERVS71-1P61550 626 aa17■□□□□ 0.31
HDAC7-220ENST00000471235 SNRPD2P62316 118 aaKnown RBP17■□□□□ 0.31
HDAC7-220ENST00000471235 Q5PR19 223 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms