RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 LIMS3P0CW19 117 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 LIMS4P0CW20 117 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 HOXB1P14653 301 aaPredicted RBP10.15□□□□□ -0.78
FN1-217ENST00000471193 ZNF32P17041 273 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 MYL12AP19105 171 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 HOXC12P31275 282 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 UGT2B10P36537 528 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 CDH15P55291 814 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 PCBD1P61457 104 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 FAM27E3Q08E93 113 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 SCRN3Q0VDG4 424 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 IRF3Q14653 427 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 RNLSQ5VYX0 342 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 ZNF773Q6PK81 442 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 CCDC36Q8IYA8 594 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 WDR31Q8NA23 367 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 STEAP2Q8NFT2 490 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 OR10S1Q8NGN2 331 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 OR2AJ1Q8NGZ0 328 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 CA5BP1Q8WTZ4 195 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 ASB17Q8WXJ9 295 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 S100PBPQ96BU1 408 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 ABHD6Q9BV23 337 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 CDCA4Q9BXL8 241 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 HDHD5Q9BXW7 423 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 TTTY10Q9BZA0 68 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 OR10A4Q9H209 315 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 KCNN2Q9H2S1 579 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 C1orf198Q9H425 327 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 NOX3Q9HBY0 568 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 OBP2BQ9NPH6 170 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 PNRC2Q9NPJ4 139 aaKnown RBP10.15□□□□□ -0.78
FN1-217ENST00000471193 ERVK13-1Q9NX77 482 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 B3GNT2Q9NY97 397 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 AMDHD2Q9Y303 409 aa10.15□□□□□ -0.78
FN1-217ENST00000471193 NBASA2RRP1 2371 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 TMEM129A0AVI4 362 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 DAPL1A0PJW8 107 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 C16orf97H3BN30 126 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 PYCARD-AS1I3L0S3 204 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 RER1O15258 196 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 CLDN14O95500 239 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 PATE4P0C8F1 98 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 SMIM18P0DKX4 95 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 CAPZA2P47755 286 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 ETV1P50549 477 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 UBE2NP61088 152 aaKnown RBP10.14□□□□□ -0.79
FN1-217ENST00000471193 TUBA1BP68363 451 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 TUBA4AP68366 448 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 ROM1Q03395 351 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 EGR3Q06889 387 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 TFF3Q07654 80 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 GALEQ14376 348 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 RAB35Q15286 201 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 TBCEQ15813 527 aaPredicted RBP10.14□□□□□ -0.79
FN1-217ENST00000471193 GSG1Q2KHT4 349 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 CDONQ4KMG0 1287 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 CCDC92Q53HC0 331 aaPredicted RBP10.14□□□□□ -0.79
FN1-217ENST00000471193 TIMM23BQ5SRD1 257 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 ZNF684Q5T5D7 378 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 C1QTNF12Q5T7M4 302 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 XKRXQ6PP77 449 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 ZNF322Q6U7Q0 402 aaPredicted RBP10.14□□□□□ -0.79
FN1-217ENST00000471193 TUBA1AQ71U36 451 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 GJC3Q8NFK1 279 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 THEM6Q8WUY1 208 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 RNF133Q8WVZ7 376 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 RNASE6Q93091 150 aaKnown RBP10.14□□□□□ -0.79
FN1-217ENST00000471193 SLAMF6Q96DU3 332 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 OR8B4Q96RC9 309 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 USB1Q9BQ65 265 aaKnown RBP10.14□□□□□ -0.79
FN1-217ENST00000471193 ALG8Q9BVK2 526 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 OR2H1Q9GZK4 316 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 ACTR6Q9GZN1 396 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 CCDC90BQ9GZT6 254 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 WNT5BQ9H1J7 359 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 KCNJ16Q9NPI9 418 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 DDX28Q9NUL7 540 aaKnown RBP10.14□□□□□ -0.79
FN1-217ENST00000471193 TIMM10BQ9Y5J6 103 aa10.14□□□□□ -0.79
FN1-217ENST00000471193 ESPL1Q14674 2120 aa10.13□□□□□ -0.79
FN1-217ENST00000471193 MAGEA13PA6NCF6 341 aa10.13□□□□□ -0.79
FN1-217ENST00000471193 TRIM64CA6NLI5 447 aa10.13□□□□□ -0.79
FN1-217ENST00000471193 ZNF878C9JN71 531 aa10.13□□□□□ -0.79
FN1-217ENST00000471193 MYL12BO14950 172 aa10.13□□□□□ -0.79
FN1-217ENST00000471193 SGCEO43556 437 aa10.13□□□□□ -0.79
FN1-217ENST00000471193 DOK2O60496 412 aa10.13□□□□□ -0.79
FN1-217ENST00000471193 ABHD16AO95870 558 aa10.13□□□□□ -0.79
FN1-217ENST00000471193 CD79AP11912 226 aa10.13□□□□□ -0.79
FN1-217ENST00000471193 PLA2G2AP14555 144 aa10.13□□□□□ -0.79
FN1-217ENST00000471193 ARR3P36575 388 aa10.13□□□□□ -0.79
FN1-217ENST00000471193 OPRL1P41146 370 aa10.13□□□□□ -0.79
FN1-217ENST00000471193 ACTA2P62736 377 aa10.13□□□□□ -0.79
FN1-217ENST00000471193 ACTG2P63267 376 aa10.13□□□□□ -0.79
FN1-217ENST00000471193 SORDQ00796 357 aa10.13□□□□□ -0.79
FN1-217ENST00000471193 PSG4Q00888 419 aa10.13□□□□□ -0.79
FN1-217ENST00000471193 PABPC1L2AQ5JQF8 200 aa10.13□□□□□ -0.79
FN1-217ENST00000471193 ELFN2Q5R3F8 820 aa10.13□□□□□ -0.79
FN1-217ENST00000471193 TMEM53Q6P2H8 277 aa10.13□□□□□ -0.79
FN1-217ENST00000471193 TMEM154Q6P9G4 183 aa10.13□□□□□ -0.79
FN1-217ENST00000471193 RHOUQ7L0Q8 258 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms