RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 TBCCD1Q9NVR7 557 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 GRHPRQ9UBQ7 328 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 DYSFO75923 2080 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 H7C1C5 153 aa14.8□□□□□ -0.04
COL7A1-208ENST00000470076 CXCR6O00574 342 aa14.8□□□□□ -0.04
COL7A1-208ENST00000470076 XKRYO14609 159 aa14.8□□□□□ -0.04
COL7A1-208ENST00000470076 TIMM8AO60220 97 aaPredicted RBP14.8□□□□□ -0.04
COL7A1-208ENST00000470076 ABHD16AO95870 558 aa14.8□□□□□ -0.04
COL7A1-208ENST00000470076 CD14P08571 375 aa14.8□□□□□ -0.04
COL7A1-208ENST00000470076 COMPP49747 757 aaPredicted RBP14.8□□□□□ -0.04
COL7A1-208ENST00000470076 LCN6P62502 163 aa14.8□□□□□ -0.04
COL7A1-208ENST00000470076 TNFAIP6P98066 277 aaPredicted RBP14.8□□□□□ -0.04
COL7A1-208ENST00000470076 LIPEQ05469 1076 aa14.8□□□□□ -0.04
COL7A1-208ENST00000470076 PSG7Q13046 419 aa14.8□□□□□ -0.04
COL7A1-208ENST00000470076 CDK5R2Q13319 367 aa14.8□□□□□ -0.04
COL7A1-208ENST00000470076 CBLL1Q75N03 491 aa14.8□□□□□ -0.04
COL7A1-208ENST00000470076 RRM2BQ7LG56 351 aa14.8□□□□□ -0.04
COL7A1-208ENST00000470076 POU5F2Q8N7G0 328 aa14.8□□□□□ -0.04
COL7A1-208ENST00000470076 ST7LQ8TDW4 575 aa14.8□□□□□ -0.04
COL7A1-208ENST00000470076 RBM4Q9BWF3 364 aaKnown RBP14.8□□□□□ -0.04
COL7A1-208ENST00000470076 ANKRD19PQ9H560 264 aa14.8□□□□□ -0.04
COL7A1-208ENST00000470076 C7orf69Q9H7B7 122 aa14.8□□□□□ -0.04
COL7A1-208ENST00000470076 EMC7Q9NPA0 242 aa14.8□□□□□ -0.04
COL7A1-208ENST00000470076 UBAP1Q9NZ09 502 aa14.8□□□□□ -0.04
COL7A1-208ENST00000470076 ARMCX1Q9P291 453 aa14.8□□□□□ -0.04
COL7A1-208ENST00000470076 ADAM18Q9Y3Q7 739 aa14.8□□□□□ -0.04
COL7A1-208ENST00000470076 PPIAL4EA0A075B759 164 aa14.79□□□□□ -0.04
COL7A1-208ENST00000470076 PPIAL4CA0A0B4J2A2 164 aa14.79□□□□□ -0.04
COL7A1-208ENST00000470076 PPIAL4DF5H284 164 aa14.79□□□□□ -0.04
COL7A1-208ENST00000470076 CDC42EP2O14613 210 aa14.79□□□□□ -0.04
COL7A1-208ENST00000470076 GSTA4O15217 222 aa14.79□□□□□ -0.04
COL7A1-208ENST00000470076 SGCEO43556 437 aa14.79□□□□□ -0.04
COL7A1-208ENST00000470076 PRSS23O95084 383 aa14.79□□□□□ -0.04
COL7A1-208ENST00000470076 SCG5P05408 212 aa14.79□□□□□ -0.04
COL7A1-208ENST00000470076 PPIAL4FP0DN26 164 aa14.79□□□□□ -0.04
COL7A1-208ENST00000470076 ADRA2CP18825 462 aa14.79□□□□□ -0.04
COL7A1-208ENST00000470076 TNFSF4P23510 183 aa14.79□□□□□ -0.04
COL7A1-208ENST00000470076 GPR4P46093 362 aa14.79□□□□□ -0.04
COL7A1-208ENST00000470076 LIMS1P48059 325 aa14.79□□□□□ -0.04
COL7A1-208ENST00000470076 ZBED5Q49AG3 693 aa14.79□□□□□ -0.04
COL7A1-208ENST00000470076 FKBP9P1Q75LS8 142 aa14.79□□□□□ -0.04
COL7A1-208ENST00000470076 GCDHQ92947 438 aaPredicted RBP14.79□□□□□ -0.04
COL7A1-208ENST00000470076 Q96M85 177 aa14.79□□□□□ -0.04
COL7A1-208ENST00000470076 COG8Q96MW5 612 aa14.79□□□□□ -0.04
COL7A1-208ENST00000470076 ZNF570Q96NI8 536 aa14.79□□□□□ -0.04
COL7A1-208ENST00000470076 HOPXQ9BPY8 73 aaPredicted RBP14.79□□□□□ -0.04
COL7A1-208ENST00000470076 GMPR2Q9P2T1 348 aaKnown RBP14.79□□□□□ -0.04
COL7A1-208ENST00000470076 TMEM5Q9Y2B1 443 aa14.79□□□□□ -0.04
COL7A1-208ENST00000470076 NPTNQ9Y639 398 aa14.79□□□□□ -0.04
COL7A1-208ENST00000470076 TEX13CA0A0J9YWL9 993 aa14.78□□□□□ -0.04
COL7A1-208ENST00000470076 TMEM89A2RUT3 159 aa14.78□□□□□ -0.04
COL7A1-208ENST00000470076 PRSS37A4D1T9 235 aa14.78□□□□□ -0.04
COL7A1-208ENST00000470076 DOK2O60496 412 aa14.78□□□□□ -0.04
COL7A1-208ENST00000470076 FOXH1O75593 365 aa14.78□□□□□ -0.04
COL7A1-208ENST00000470076 TNFRSF1AP19438 455 aa14.78□□□□□ -0.04
COL7A1-208ENST00000470076 KITLGP21583 273 aa14.78□□□□□ -0.04
COL7A1-208ENST00000470076 HTR5AP47898 357 aa14.78□□□□□ -0.04
COL7A1-208ENST00000470076 LCN2P80188 198 aa14.78□□□□□ -0.04
COL7A1-208ENST00000470076 SPRNQ5BIV9 151 aa14.78□□□□□ -0.04
COL7A1-208ENST00000470076 MESTQ5EB52 335 aa14.78□□□□□ -0.04
COL7A1-208ENST00000470076 TBPL2Q6SJ96 375 aa14.78□□□□□ -0.04
COL7A1-208ENST00000470076 FAM122BQ7Z309 247 aa14.78□□□□□ -0.04
COL7A1-208ENST00000470076 CYP4Z1Q86W10 505 aa14.78□□□□□ -0.04
COL7A1-208ENST00000470076 BPIFB2Q8N4F0 458 aa14.78□□□□□ -0.04
COL7A1-208ENST00000470076 HSH2DQ96JZ2 352 aa14.78□□□□□ -0.04
COL7A1-208ENST00000470076 SAMD8Q96LT4 415 aa14.78□□□□□ -0.04
COL7A1-208ENST00000470076 NMNAT1Q9HAN9 279 aaPredicted RBP14.78□□□□□ -0.04
COL7A1-208ENST00000470076 TMEM106BQ9NUM4 274 aa14.78□□□□□ -0.04
COL7A1-208ENST00000470076 PURGQ9UJV8 347 aaKnown RBP14.78□□□□□ -0.04
COL7A1-208ENST00000470076 NME4O00746 187 aa14.77□□□□□ -0.05
COL7A1-208ENST00000470076 NDUFAB1O14561 156 aa14.77□□□□□ -0.05
COL7A1-208ENST00000470076 SERPINA1P01009 418 aa14.77□□□□□ -0.05
COL7A1-208ENST00000470076 FSHBP01225 129 aa14.77□□□□□ -0.05
COL7A1-208ENST00000470076 IGHV2-70P01814 119 aa14.77□□□□□ -0.05
COL7A1-208ENST00000470076 COX4I1P13073 169 aa14.77□□□□□ -0.05
COL7A1-208ENST00000470076 ZNF26P17031 533 aaPredicted RBP14.77□□□□□ -0.05
COL7A1-208ENST00000470076 FPR2P25090 351 aa14.77□□□□□ -0.05
COL7A1-208ENST00000470076 SLC7A2P52569 658 aa14.77□□□□□ -0.05
COL7A1-208ENST00000470076 AQP6Q13520 282 aa14.77□□□□□ -0.05
COL7A1-208ENST00000470076 GPR139Q6DWJ6 353 aa14.77□□□□□ -0.05
COL7A1-208ENST00000470076 ZNF771Q7L3S4 317 aaPredicted RBP14.77□□□□□ -0.05
COL7A1-208ENST00000470076 VASH1Q7L8A9 365 aaPredicted RBP14.77□□□□□ -0.05
COL7A1-208ENST00000470076 SPICQ8N5J4 248 aa14.77□□□□□ -0.05
COL7A1-208ENST00000470076 SLC6A7Q99884 636 aa14.77□□□□□ -0.05
COL7A1-208ENST00000470076 CCDC134Q9H6E4 229 aa14.77□□□□□ -0.05
COL7A1-208ENST00000470076 PLEK2Q9NYT0 353 aa14.77□□□□□ -0.05
COL7A1-208ENST00000470076 OPN4Q9UHM6 478 aa14.77□□□□□ -0.05
COL7A1-208ENST00000470076 ENPP4Q9Y6X5 453 aa14.77□□□□□ -0.05
COL7A1-208ENST00000470076 SURF4O15260 269 aa14.76□□□□□ -0.05
COL7A1-208ENST00000470076 NDUFB2O95178 105 aa14.76□□□□□ -0.05
COL7A1-208ENST00000470076 SBK2P0C263 348 aa14.76□□□□□ -0.05
COL7A1-208ENST00000470076 CTLA4P16410 223 aa14.76□□□□□ -0.05
COL7A1-208ENST00000470076 SDHAP31040 664 aa14.76□□□□□ -0.05
COL7A1-208ENST00000470076 GSK3BP49841 420 aa14.76□□□□□ -0.05
COL7A1-208ENST00000470076 LSM6P62312 80 aaKnown RBP14.76□□□□□ -0.05
COL7A1-208ENST00000470076 TMEM155Q4W5P6 130 aa14.76□□□□□ -0.05
COL7A1-208ENST00000470076 KLHL36Q8N4N3 616 aa14.76□□□□□ -0.05
COL7A1-208ENST00000470076 ZNF283Q8N7M2 679 aa14.76□□□□□ -0.05
COL7A1-208ENST00000470076 C3orf56Q8N813 242 aa14.76□□□□□ -0.05
COL7A1-208ENST00000470076 OR2Z1Q8NG97 314 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms