RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 NUDT14O95848 222 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 CD8AP01732 235 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 FGF2P09038 288 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 RAB6AP20340 208 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 MPZP25189 248 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 CD27P26842 260 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 C14orf28Q4W4Y0 310 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 ALKAL2Q6UX46 152 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 GALNT16Q8N428 558 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 OR51A2Q8NGJ7 313 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 OR5M9Q8NGP3 310 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 ST7LQ8TDW4 575 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 LINC00052Q96N35 136 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 SHARPINQ9H0F6 387 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 SEMA5BQ9P283 1151 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 COA3Q9Y2R0 106 aaPredicted RBP12.23□□□□□ -0.45
BRCA1-209ENST00000470026 A6NIZ1 184 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 C2CD4DB7Z1M9 353 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 LMO7DNF2Z398 122 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 CD38P28907 300 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 RAP1BP61224 184 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 RAP1AP62834 184 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 PMPCAQ10713 525 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 C4orf46Q504U0 113 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 PHF19Q5T6S3 580 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 ATPAF1Q5TC12 328 aaPredicted RBP12.23□□□□□ -0.45
BRCA1-209ENST00000470026 SLC29A4Q7RTT9 530 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 HSD17B13Q7Z5P4 300 aaPredicted RBP12.23□□□□□ -0.45
BRCA1-209ENST00000470026 SLC51BQ86UW2 128 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 C12orf45Q8N5I9 185 aaPredicted RBP12.23□□□□□ -0.45
BRCA1-209ENST00000470026 NKAIN3Q8N8D7 197 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 OR8S1Q8NH09 359 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 OR1L3Q8NH93 324 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 DUSP19Q8WTR2 217 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 RLN3Q8WXF3 142 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 ASB10Q8WXI3 467 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 TINAGL1Q9GZM7 467 aaPredicted RBP12.23□□□□□ -0.45
BRCA1-209ENST00000470026 SLC2A8Q9NY64 477 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 CGGBP1Q9UFW8 167 aaPredicted RBP12.23□□□□□ -0.45
BRCA1-209ENST00000470026 CACNA1CQ13936 2221 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 KRBOX1C9JBD0 128 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 MS4A18H0YCH9 400 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 MPZL1O95297 269 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 CAPZA1P52907 286 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 HSD11B2P80365 405 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 MELKQ14680 651 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 NR0B2Q15466 257 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 NSDHLQ15738 373 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 MS4A18Q3C1V0 323 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 VWA2Q5GFL6 755 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 CLVS2Q5SYC1 327 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 ZNF704Q6ZNC4 412 aaPredicted RBP12.22□□□□□ -0.45
BRCA1-209ENST00000470026 MISPQ8IVT2 679 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 D2HGDHQ8N465 521 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 OR13C8Q8NGS7 320 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 AQP3Q92482 292 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 DMRTA2Q96SC8 542 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 NKX3-1Q99801 234 aaPredicted RBP12.22□□□□□ -0.45
BRCA1-209ENST00000470026 DPYSL5Q9BPU6 564 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 C1QTNF6Q9BXI9 259 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 OR11A1Q9GZK7 315 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 ZNF304Q9HCX3 659 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 TMEM138Q9NPI0 162 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 COPS7AQ9UBW8 275 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 OR52A1Q9UKL2 312 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 GTF2A1LQ9UNN4 478 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 KIF26BQ2KJY2 2108 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 LOC107986453A0A1B0GWG9 222 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 METTL12A8MUP2 240 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 ALOX12BO75342 701 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 ZNF217O75362 1048 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 HLA-DOBP13765 273 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 FBLP22087 321 aaKnown RBP12.22□□□□□ -0.45
BRCA1-209ENST00000470026 SORDQ00796 357 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 TUSC1Q2TAM9 212 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 PRAMEF17Q5VTA0 474 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.22□□□□□ -0.45
BRCA1-209ENST00000470026 PLPP5Q8NEB5 264 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 OR1S1Q8NH92 325 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 COQ8AQ8NI60 647 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 FOXRED1Q96CU9 486 aaPredicted RBP12.22□□□□□ -0.45
BRCA1-209ENST00000470026 KCNK17Q96T54 332 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 VN1R1Q9GZP7 353 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 MFFQ9GZY8 342 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 KLK13Q9UKR3 277 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 EMC9Q9Y3B6 208 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 SESN1Q9Y6P5 492 aa12.22□□□□□ -0.45
BRCA1-209ENST00000470026 RP1P56715 2156 aa12.21□□□□□ -0.45
BRCA1-209ENST00000470026 FREM3P0C091 2139 aa12.21□□□□□ -0.45
BRCA1-209ENST00000470026 OR14I1A6ND48 311 aa12.21□□□□□ -0.45
BRCA1-209ENST00000470026 WIPF3A6NGB9 483 aa12.21□□□□□ -0.45
BRCA1-209ENST00000470026 HLA-GP17693 338 aa12.21□□□□□ -0.45
BRCA1-209ENST00000470026 NUP62P37198 522 aaPredicted RBP12.21□□□□□ -0.45
BRCA1-209ENST00000470026 MMP16P51512 607 aa12.21□□□□□ -0.45
BRCA1-209ENST00000470026 LBX1P52954 281 aa12.21□□□□□ -0.45
BRCA1-209ENST00000470026 CFHR1Q03591 330 aa12.21□□□□□ -0.45
BRCA1-209ENST00000470026 DEFB133Q30KQ1 61 aa12.21□□□□□ -0.45
BRCA1-209ENST00000470026 MOGAT2Q3SYC2 334 aa12.21□□□□□ -0.45
BRCA1-209ENST00000470026 TMEM244Q5VVB8 128 aa12.21□□□□□ -0.45
BRCA1-209ENST00000470026 LPCAT3Q6P1A2 487 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms