RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 CCNB1IP1Q9NPC3 277 aa12.85□□□□□ -0.35
COL9A3-209ENST00000469852 CYB5R1Q9UHQ9 305 aa12.85□□□□□ -0.35
COL9A3-209ENST00000469852 POLR1DQ9Y2S0 133 aa12.85□□□□□ -0.35
COL9A3-209ENST00000469852 RTTNQ86VV8 2226 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 C12orf71A8MTZ7 269 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 ZNF593O00488 134 aaPredicted RBP12.84□□□□□ -0.35
COL9A3-209ENST00000469852 CASKO14936 926 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 APOL3O95236 402 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 RAB36O95755 333 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 SPARCP09486 303 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 HTR1FP30939 366 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 CALCRP30988 508 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 ARR3P36575 388 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 NUDT6P53370 316 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 BSPH1Q075Z2 132 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 GGTLC2Q14390 218 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 PCK2Q16822 640 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 NCMAPQ5T1S8 102 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 LAIR2Q6ISS4 152 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 TMEM53Q6P2H8 277 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 TMEM154Q6P9G4 183 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 SHFQ7M4L6 423 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 DPY19L4Q7Z388 723 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 GID4Q8IVV7 300 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 OR6N2Q8NGY6 317 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 PIK3IP1Q96FE7 263 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 MAP6Q96JE9 813 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 INTS14Q96SY0 518 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 AMELYQ99218 206 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 APOL4Q9BPW4 351 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 KCNN2Q9H2S1 579 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 ADGRL4Q9HBW9 690 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 H2AFY2Q9P0M6 372 aaPredicted RBP12.84□□□□□ -0.35
COL9A3-209ENST00000469852 KCNN3Q9UGI6 736 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 KCNG2Q9UJ96 466 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 GDF2Q9UK05 429 aaPredicted RBP12.84□□□□□ -0.35
COL9A3-209ENST00000469852 KLHDC2Q9Y2U9 406 aa12.84□□□□□ -0.35
COL9A3-209ENST00000469852 FBN2P35556 2912 aa12.83□□□□□ -0.36
COL9A3-209ENST00000469852 A0A1W2PPR1 153 aa12.83□□□□□ -0.36
COL9A3-209ENST00000469852 SLC22A31A6NKX4 558 aa12.83□□□□□ -0.36
COL9A3-209ENST00000469852 A6NNC1 897 aa12.83□□□□□ -0.36
COL9A3-209ENST00000469852 PLAUP00749 431 aa12.83□□□□□ -0.36
COL9A3-209ENST00000469852 CCL2P13500 99 aa12.83□□□□□ -0.36
COL9A3-209ENST00000469852 ZNF823P16415 610 aa12.83□□□□□ -0.36
COL9A3-209ENST00000469852 CD40P25942 277 aa12.83□□□□□ -0.36
COL9A3-209ENST00000469852 APEX1P27695 318 aaKnown RBP12.83□□□□□ -0.36
COL9A3-209ENST00000469852 BLVRAP53004 296 aa12.83□□□□□ -0.36
COL9A3-209ENST00000469852 IL18R1Q13478 541 aa12.83□□□□□ -0.36
COL9A3-209ENST00000469852 DAZAP2Q15038 168 aaPredicted RBP12.83□□□□□ -0.36
COL9A3-209ENST00000469852 TEX30Q5JUR7 227 aa12.83□□□□□ -0.36
COL9A3-209ENST00000469852 LCN1P1Q5VSP4 162 aa12.83□□□□□ -0.36
COL9A3-209ENST00000469852 VASH1Q7L8A9 365 aaPredicted RBP12.83□□□□□ -0.36
COL9A3-209ENST00000469852 DCXRQ7Z4W1 244 aa12.83□□□□□ -0.36
COL9A3-209ENST00000469852 DPPA2Q7Z7J5 298 aa12.83□□□□□ -0.36
COL9A3-209ENST00000469852 SYT9Q86SS6 491 aa12.83□□□□□ -0.36
COL9A3-209ENST00000469852 C8orf59Q8N0T1 100 aaPredicted RBP12.83□□□□□ -0.36
COL9A3-209ENST00000469852 PAQR4Q8N4S7 273 aaPredicted RBP12.83□□□□□ -0.36
COL9A3-209ENST00000469852 RFLNBQ8N5W9 214 aa12.83□□□□□ -0.36
COL9A3-209ENST00000469852 FAM169BQ8N8A8 192 aa12.83□□□□□ -0.36
COL9A3-209ENST00000469852 ST7LQ8TDW4 575 aa12.83□□□□□ -0.36
COL9A3-209ENST00000469852 SLC7A6Q92536 515 aa12.83□□□□□ -0.36
COL9A3-209ENST00000469852 AMBNQ9NP70 447 aa12.83□□□□□ -0.36
COL9A3-209ENST00000469852 PNRC2Q9NPJ4 139 aaKnown RBP12.83□□□□□ -0.36
COL9A3-209ENST00000469852 COPS3Q9UNS2 423 aa12.83□□□□□ -0.36
COL9A3-209ENST00000469852 TIMM10BQ9Y5J6 103 aa12.83□□□□□ -0.36
COL9A3-209ENST00000469852 CREBBPQ92793 2442 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 ABCA4P78363 2273 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 HEATR1Q9H583 2144 aaKnown RBP12.82□□□□□ -0.36
COL9A3-209ENST00000469852 LOC100509620A0A075B734 347 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 FAM221AA4D161 298 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 PRR32B1ATL7 298 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 SGCEO43556 437 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 SYNGR3O43761 229 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 MPZL2O60487 215 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 DOK2O60496 412 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 SERPINA5P05154 406 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 PCBD1P61457 104 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 ZNF91Q05481 1191 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 SCRN3Q0VDG4 424 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 BEX5Q5H9J7 111 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 C1QTNF12Q5T7M4 302 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 MEDAGQ5VYS4 303 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 CDC20BQ86Y33 519 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 SETD9Q8NE22 299 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 OR4F15Q8NGB8 312 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 OR51G2Q8NGK0 314 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 FBLIM1Q8WUP2 373 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 NEUROG1Q92886 237 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 CNN2Q99439 309 aaKnown RBP12.82□□□□□ -0.36
COL9A3-209ENST00000469852 RHNO1Q9BSD3 238 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 CDADC1Q9BWV3 514 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 CLN6Q9NWW5 311 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 HAO2Q9NYQ3 351 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 PLEK2Q9NYT0 353 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 WARS2Q9UGM6 360 aaKnown RBP12.82□□□□□ -0.36
COL9A3-209ENST00000469852 PCDHGB5Q9Y5G0 923 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 LRBAP50851 2863 aa12.82□□□□□ -0.36
COL9A3-209ENST00000469852 IGHV2OR16-5A0A0B4J2B6 119 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 OR6C6A6NF89 314 aa12.81□□□□□ -0.36
COL9A3-209ENST00000469852 ATP6V1G2-DDX39BF2Z307 99 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms