RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 IDSB3KWA1 339 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 FGF16O43320 207 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 RDH16O75452 317 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 PCCBP05166 539 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 GLB1P16278 677 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 PEBP1P30086 187 aaKnown RBP8.64□□□□□ -1.03
HDAC3-205ENST00000469550 MAGEB1P43366 347 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 GPR143P51810 404 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 TAS2R19P59542 299 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 TSC22D1Q15714 1073 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 NKAIN2Q5VXU1 208 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 HAGHLQ6PII5 290 aaPredicted RBP8.64□□□□□ -1.03
HDAC3-205ENST00000469550 ZNF813Q6ZN06 617 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 LDLRAD3Q86YD5 345 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 SPAG16Q8N0X2 631 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 PUSL1Q8N0Z8 303 aaKnown RBP8.64□□□□□ -1.03
HDAC3-205ENST00000469550 DMBX1Q8NFW5 382 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 NARS2Q96I59 477 aaKnown RBP8.64□□□□□ -1.03
HDAC3-205ENST00000469550 NMNAT3Q96T66 252 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 MNTQ99583 582 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 CHST6Q9GZX3 395 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 WDR13Q9H1Z4 485 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 SLCO5A1Q9H2Y9 848 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 POFUT1Q9H488 388 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 TMEM185BQ9H7F4 350 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 ADAP2Q9NPF8 381 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 COMMD9Q9P000 198 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 FRRS1LQ9P0K9 344 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 CTSFQ9UBX1 484 aa8.64□□□□□ -1.03
HDAC3-205ENST00000469550 MGAQ8IWI9 3026 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 NPIPA5A0A0B4J1W7 369 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 OR4C45A6NMZ5 311 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 NPIPA7E9PJI5 369 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 EFSO43281 561 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 CDC40O60508 579 aaKnown RBP eCLIP8.63□□□□□ -1.03
HDAC3-205ENST00000469550 NKX2-2O95096 273 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 ABHD16AO95870 558 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 WNT11O96014 354 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 CD3DP04234 171 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 HEXAP06865 529 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 ZNF888P0CJ79 500 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-205ENST00000469550 NPIPA8P0DM63 369 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 LIPCP11150 499 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 APEHP13798 732 aaKnown RBP8.63□□□□□ -1.03
HDAC3-205ENST00000469550 CD82P27701 267 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 RPL35P42766 123 aaKnown RBP8.63□□□□□ -1.03
HDAC3-205ENST00000469550 MEOX2P50222 304 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 AKR1D1P51857 326 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 LUMP51884 338 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-205ENST00000469550 GPR85P60893 370 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 LY6DQ14210 128 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 C14orf28Q4W4Y0 310 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 FAM74A1Q5RGS3 127 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 LIPNQ5VXI9 398 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 C3orf33Q6P1S2 294 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 FIGNL1Q6PIW4 674 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 ZNF550Q7Z398 422 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 C17orf82Q86X59 251 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-205ENST00000469550 GABRG1Q8N1C3 465 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 STEAP2Q8NFT2 490 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 OR6K6Q8NGW6 343 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 STK35Q8TDR2 534 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 GPR148Q8TDV2 347 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 OR1E3Q8WZA6 343 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 MCHR2Q969V1 340 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 TM4SF19Q96DZ7 209 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 VRK1Q99986 396 aaPredicted RBP8.63□□□□□ -1.03
HDAC3-205ENST00000469550 ALG12Q9BV10 488 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 ESRP2Q9H6T0 727 aaKnown RBP8.63□□□□□ -1.03
HDAC3-205ENST00000469550 FGF22Q9HCT0 170 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 DNAJB12Q9NXW2 375 aaKnown RBP8.63□□□□□ -1.03
HDAC3-205ENST00000469550 SPHK1Q9NYA1 384 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 MRM2Q9UI43 246 aaKnown RBP8.63□□□□□ -1.03
HDAC3-205ENST00000469550 DAPP1Q9UN19 280 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 ZNF337Q9Y3M9 751 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 OR1A2Q9Y585 309 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 SLC22A7Q9Y694 548 aa8.63□□□□□ -1.03
HDAC3-205ENST00000469550 TRAV18A0A075B6X5 111 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 RNF222A6NCQ9 220 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 TMEM212A6NML5 194 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 NUDT21O43809 227 aaKnown RBP8.62□□□□□ -1.03
HDAC3-205ENST00000469550 B3GALT2O43825 422 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 PVALBP20472 110 aaPredicted RBP8.62□□□□□ -1.03
HDAC3-205ENST00000469550 RPL4P36578 427 aaKnown RBP8.62□□□□□ -1.03
HDAC3-205ENST00000469550 PRPS1P60891 318 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 RPS4XP62701 263 aaKnown RBP8.62□□□□□ -1.03
HDAC3-205ENST00000469550 UBE2IP63279 158 aaKnown RBP8.62□□□□□ -1.03
HDAC3-205ENST00000469550 PLA2G7Q13093 441 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 RUNX2Q13950 521 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 TMEM205Q6UW68 189 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 NDUFAF7Q7L592 441 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 OR4N5Q8IXE1 308 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 EXD3Q8N9H8 876 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 OR1J4Q8NGS1 313 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 STOML3Q8TAV4 291 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 Q96M85 177 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 ADAD1Q96M93 576 aaKnown RBP8.62□□□□□ -1.03
HDAC3-205ENST00000469550 COMMD4Q9H0A8 199 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 LYRM4Q9HD34 91 aa8.62□□□□□ -1.03
HDAC3-205ENST00000469550 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms