RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 POM121L2Q96KW2 1035 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 DHRS9Q9BPW9 319 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 WDR76Q9H967 626 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 CDH20Q9HBT6 801 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 C8orf4Q9NR00 106 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 CA10Q9NS85 328 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 CYB5R1Q9UHQ9 305 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 ST6GALNAC2Q9UJ37 374 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 NDRG4Q9ULP0 352 aaKnown RBP10.34□□□□□ -0.75
VPS13D-204ENST00000469054 PLEKHA6Q9Y2H5 1048 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 LHFPL6Q9Y693 200 aa10.34□□□□□ -0.75
VPS13D-204ENST00000469054 CADP27708 2225 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 LOC100509620A0A075B734 347 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 E9PQ18 207 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 H0YHG0 523 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 M0R129 80 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 ZNF593O00488 134 aaPredicted RBP10.33□□□□□ -0.76
VPS13D-204ENST00000469054 PRODHO43272 600 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 DOK2O60496 412 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 TMCC2O75069 709 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 SNAP29O95721 258 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 RAF1P04049 648 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 DANCRP0C864 163 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 CCNOP22674 350 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 NR4A1P22736 598 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 GSTT1P30711 240 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 APOBEC3AP31941 199 aaPredicted RBP10.33□□□□□ -0.76
VPS13D-204ENST00000469054 ENTPD1P49961 510 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 FABP6P51161 128 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 HIST1H3AP68431 136 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 NKX6-1P78426 367 aaPredicted RBP10.33□□□□□ -0.76
VPS13D-204ENST00000469054 GALK2Q01415 458 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 PCK2Q16822 640 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 LRRC36Q1X8D7 754 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 TEX30Q5JUR7 227 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 SLC35D3Q5M8T2 416 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 HIST2H3PS2Q5TEC6 136 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 KRT80Q6KB66 452 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 SLC18B1Q6NT16 456 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 ZNF544Q6NX49 715 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 HIST2H3AQ71DI3 136 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 VASH1Q7L8A9 365 aaPredicted RBP10.33□□□□□ -0.76
VPS13D-204ENST00000469054 CDH24Q86UP0 819 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 LINC00346Q8IVM7 164 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 GALNT4Q8N4A0 578 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 PAQR4Q8N4S7 273 aaPredicted RBP10.33□□□□□ -0.76
VPS13D-204ENST00000469054 OR2AJ1Q8NGZ0 328 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 TMEM163Q8TC26 289 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 NINJ1Q92982 152 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 HRASLS5Q96KN8 279 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 IL4I1Q96RQ9 567 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 MBOAT4Q96T53 435 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 TOR3AQ9H497 397 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 H2AFY2Q9P0M6 372 aaPredicted RBP10.33□□□□□ -0.76
VPS13D-204ENST00000469054 GDF2Q9UK05 429 aaPredicted RBP10.33□□□□□ -0.76
VPS13D-204ENST00000469054 SPEF1Q9Y4P9 236 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 COMMD3-BMI1R4GMX3 469 aa10.33□□□□□ -0.76
VPS13D-204ENST00000469054 C5orf49A4QMS7 147 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 VSTM5A8MXK1 200 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 CASQ2O14958 399 aaPredicted RBP10.32□□□□□ -0.76
VPS13D-204ENST00000469054 SYNGR3O43761 229 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 ATE1O95260 518 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 SOD3P08294 240 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 CD53P19397 219 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 SLC2A5P22732 501 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 DNASE1P24855 282 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 PEX2P28328 305 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 PCSK6P29122 969 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 TTKP33981 857 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 RPS27P42677 84 aaKnown RBP10.32□□□□□ -0.76
VPS13D-204ENST00000469054 HTR5AP47898 357 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 CDC42P60953 191 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 RPS7P62081 194 aaKnown RBP10.32□□□□□ -0.76
VPS13D-204ENST00000469054 SLC34A1Q06495 639 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 SNTB2Q13425 540 aaKnown RBP10.32□□□□□ -0.76
VPS13D-204ENST00000469054 APOFQ13790 326 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 RAB35Q15286 201 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 ELFN2Q5R3F8 820 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 AADACL4Q5VUY2 407 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 NXNL2Q5VZ03 156 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 VHLLQ6RSH7 139 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 TIGD4Q8IY51 512 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 FBXL14Q8N1E6 418 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 PACRGLQ8N7B6 248 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 OR8J1Q8NGP2 316 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 OR1F12Q8NHA8 337 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 TRUB1Q8WWH5 349 aaKnown RBP10.32□□□□□ -0.76
VPS13D-204ENST00000469054 PIGTQ969N2 578 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 ZMYND19Q96E35 227 aaPredicted RBP10.32□□□□□ -0.76
VPS13D-204ENST00000469054 RDH12Q96NR8 316 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 INTS14Q96SY0 518 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 TEAD3Q99594 435 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 PITX2Q99697 317 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 ZNF442Q9H7R0 627 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 MARCH7Q9H992 704 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 FAIMQ9NVQ4 179 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 NKX1-2Q9UD57 310 aaPredicted RBP10.32□□□□□ -0.76
VPS13D-204ENST00000469054 LAMP3Q9UQV4 416 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 FBN2P35556 2912 aa10.32□□□□□ -0.76
VPS13D-204ENST00000469054 LOC100130705A0A1B0GUX0 176 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms