RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 ACHEP22303 614 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 CALB2P22676 271 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 GCH1P30793 250 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 SLC6A6P31641 620 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 MAGEB1P43366 347 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 LSM6P62312 80 aaKnown RBP14.6□□□□□ -0.07
SSBP1-207ENST00000468267 KCNMB1Q16558 191 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 PCGF3Q3KNV8 242 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 SPATA46Q5T0L3 261 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 MBNL2Q5VZF2 373 aaKnown RBP14.6□□□□□ -0.07
SSBP1-207ENST00000468267 FAM166AQ6J272 317 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 RINLQ6ZS11 566 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 ABHD4Q8TB40 342 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 SLC25A40Q8TBP6 338 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 KLF14Q8TD94 323 aaPredicted RBP14.6□□□□□ -0.07
SSBP1-207ENST00000468267 GNPDA2Q8TDQ7 276 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 HPS1Q92902 700 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 YIPF5Q969M3 257 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 C4orf45Q96LM5 186 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 OR52D1Q9H346 318 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 MUC13Q9H3R2 512 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 ELOVL3Q9HB03 270 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 NKIRAS2Q9NYR9 191 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 CDC42EP3Q9UKI2 254 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 NDRG4Q9ULP0 352 aaKnown RBP14.6□□□□□ -0.07
SSBP1-207ENST00000468267 TCRBV5S2A0A599 114 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 H3BSA7 217 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 ARPC3O15145 178 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 SGCEO43556 437 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 LMX1BO60663 402 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 NGFP01138 241 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 MT-ND5P03915 603 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 CRABP1P29762 137 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 MPV17P39210 176 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 MAGEA2P43356 314 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 TMEM33P57088 247 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 PPP1CBP62140 327 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 TSPAN31Q12999 210 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 AQP6Q13520 282 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 TRIM25Q14258 630 aaKnown RBP14.59□□□□□ -0.07
SSBP1-207ENST00000468267 TRIP10Q15642 601 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 LCN8Q6JVE9 175 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 PGBD2Q6P3X8 592 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 ARL9Q6T311 187 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 RFPL4BQ6ZWI9 263 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 VASH1Q7L8A9 365 aaPredicted RBP14.59□□□□□ -0.07
SSBP1-207ENST00000468267 DHFR2Q86XF0 187 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 IPCEF1Q8WWN9 437 aaPredicted RBP14.59□□□□□ -0.07
SSBP1-207ENST00000468267 GTF3AQ92664 365 aaKnown RBP14.59□□□□□ -0.07
SSBP1-207ENST00000468267 SAMD8Q96LT4 415 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 SNX18Q96RF0 628 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 SOX7Q9BT81 388 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 IFT27Q9BW83 186 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 OR2J1Q9GZK6 312 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 LYVE1Q9Y5Y7 322 aa14.59□□□□□ -0.07
SSBP1-207ENST00000468267 IDH3BO43837 385 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 DOK2O60496 412 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 RP2O75695 350 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 IL2RGP31785 369 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 GPR6P46095 362 aaPredicted RBP14.58□□□□□ -0.08
SSBP1-207ENST00000468267 HTR5AP47898 357 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 MMP15P51511 669 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 ARHGDIAP52565 204 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 CCL8P80075 99 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 MS4A2Q01362 244 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 GLO1Q04760 184 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 TMEM255AQ5JRV8 349 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 OTPQ5XKR4 325 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 LEG1Q6P5S2 330 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 LINC00471Q8N535 108 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 TSSK2Q96PF2 358 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 BEX2Q9BXY8 128 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 TRIM15Q9C019 465 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 MAGIXQ9H6Y5 334 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 ZNF275Q9NSD4 429 aaPredicted RBP14.58□□□□□ -0.08
SSBP1-207ENST00000468267 TBCCD1Q9NVR7 557 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 FAM53CQ9NYF3 392 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 ASH2LQ9UBL3 628 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 LPAR3Q9UBY5 353 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 KCNS2Q9ULS6 477 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 PRPF19Q9UMS4 504 aaKnown RBP14.58□□□□□ -0.08
SSBP1-207ENST00000468267 B9D1Q9UPM9 204 aa14.58□□□□□ -0.08
SSBP1-207ENST00000468267 IGLV1-36A0A0B4J1U3 117 aa14.57□□□□□ -0.08
SSBP1-207ENST00000468267 OR6C6A6NF89 314 aa14.57□□□□□ -0.08
SSBP1-207ENST00000468267 TNFRSF11BO00300 401 aa14.57□□□□□ -0.08
SSBP1-207ENST00000468267 DCTN6O00399 190 aa14.57□□□□□ -0.08
SSBP1-207ENST00000468267 ABHD16AO95870 558 aa14.57□□□□□ -0.08
SSBP1-207ENST00000468267 RENP00797 406 aa14.57□□□□□ -0.08
SSBP1-207ENST00000468267 TGFAP01135 160 aa14.57□□□□□ -0.08
SSBP1-207ENST00000468267 HIST1H1CP16403 213 aaKnown RBP14.57□□□□□ -0.08
SSBP1-207ENST00000468267 CCDC92Q53HC0 331 aaPredicted RBP14.57□□□□□ -0.08
SSBP1-207ENST00000468267 DNM1P34Q6PK57 102 aa14.57□□□□□ -0.08
SSBP1-207ENST00000468267 ZNF620Q6ZNG0 422 aa14.57□□□□□ -0.08
SSBP1-207ENST00000468267 JAZF1Q86VZ6 243 aa14.57□□□□□ -0.08
SSBP1-207ENST00000468267 OR6V1Q8N148 313 aa14.57□□□□□ -0.08
SSBP1-207ENST00000468267 OR4C15Q8NGM1 316 aa14.57□□□□□ -0.08
SSBP1-207ENST00000468267 OR4K13Q8NH42 304 aa14.57□□□□□ -0.08
SSBP1-207ENST00000468267 POP5Q969H6 163 aaKnown RBP14.57□□□□□ -0.08
SSBP1-207ENST00000468267 C1orf159Q96HA4 380 aa14.57□□□□□ -0.08
SSBP1-207ENST00000468267 NMNAT3Q96T66 252 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms