RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 IFT88Q13099 833 aa3.16□□□□□ -1.9
GAPVD1-211ENST00000467707 PTPN20Q4JDL3 420 aa3.16□□□□□ -1.9
GAPVD1-211ENST00000467707 TFDP3Q5H9I0 405 aa3.16□□□□□ -1.9
GAPVD1-211ENST00000467707 STUMQ69YW2 141 aa3.16□□□□□ -1.9
GAPVD1-211ENST00000467707 OR52W1Q6IF63 320 aa3.16□□□□□ -1.9
GAPVD1-211ENST00000467707 MICU2Q8IYU8 434 aa3.16□□□□□ -1.9
GAPVD1-211ENST00000467707 JAGN1Q8N5M9 183 aa3.16□□□□□ -1.9
GAPVD1-211ENST00000467707 PQLC3Q8N755 202 aa3.16□□□□□ -1.9
GAPVD1-211ENST00000467707 FAM86B1Q8N7N1 296 aa3.16□□□□□ -1.9
GAPVD1-211ENST00000467707 C15orf56Q8N910 161 aa3.16□□□□□ -1.9
GAPVD1-211ENST00000467707 OR5K2Q8NHB8 316 aa3.16□□□□□ -1.9
GAPVD1-211ENST00000467707 TMEM230Q96A57 120 aa3.16□□□□□ -1.9
GAPVD1-211ENST00000467707 TM4SF18Q96CE8 201 aa3.16□□□□□ -1.9
GAPVD1-211ENST00000467707 ZNF681Q96N22 645 aa3.16□□□□□ -1.9
GAPVD1-211ENST00000467707 CTSFQ9UBX1 484 aa3.16□□□□□ -1.9
GAPVD1-211ENST00000467707 PRRC2AP48634 2157 aaKnown RBP3.16□□□□□ -1.9
GAPVD1-211ENST00000467707 KCNE1BA0A087WTH5 132 aa3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 A6NDN8 102 aa3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 SMKR1H3BMG3 65 aa3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 RAD51CO43502 376 aa3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 ARG1P05089 322 aa3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 BCHEP06276 602 aa3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 IGHV1-8P0DP01 117 aa3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 CEACAM3P40198 252 aa3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 PFN3P60673 137 aa3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 RAP1AP62834 184 aa3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 IRF4Q15306 451 aa3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 NPSR1Q6W5P4 371 aa3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 MBOAT1Q6ZNC8 495 aa3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 OR9G4Q8NGQ1 327 aa3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 NUBPLQ8TB37 319 aa3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 MRGPRFQ96AM1 343 aa3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 EEF1AKMT3Q96AZ1 226 aa3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 BPIFA3Q9BQP9 254 aa3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 ACTR3CQ9C0K3 210 aaPredicted RBP3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 IQCGQ9H095 443 aaKnown RBP3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 SAV1Q9H4B6 383 aaPredicted RBP3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 ELOVL6Q9H5J4 265 aa3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 SYNDIG1Q9H7V2 258 aa3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 HMG20AQ9NP66 347 aa3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 TRMT112Q9UI30 125 aaKnown RBP3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 PSG11Q9UQ72 335 aa3.15□□□□□ -1.91
GAPVD1-211ENST00000467707 INSRP06213 1382 aa3.14□□□□□ -1.91
GAPVD1-211ENST00000467707 IGHV5-10-1A0A0J9YXX1 117 aa3.14□□□□□ -1.91
GAPVD1-211ENST00000467707 A0A1W2PNU3 283 aaPredicted RBP3.14□□□□□ -1.91
GAPVD1-211ENST00000467707 CDC40O60508 579 aaKnown RBP eCLIP3.14□□□□□ -1.91
GAPVD1-211ENST00000467707 RP2O75695 350 aa3.14□□□□□ -1.91
GAPVD1-211ENST00000467707 CCNB2O95067 398 aa3.14□□□□□ -1.91
GAPVD1-211ENST00000467707 OR8G3PP0DMU2 310 aa3.14□□□□□ -1.91
GAPVD1-211ENST00000467707 PSMC3P17980 439 aa3.14□□□□□ -1.91
GAPVD1-211ENST00000467707 PGAM1P18669 254 aa3.14□□□□□ -1.91
GAPVD1-211ENST00000467707 MAGEA1P43355 309 aa3.14□□□□□ -1.91
GAPVD1-211ENST00000467707 NCF4Q15080 339 aa3.14□□□□□ -1.91
GAPVD1-211ENST00000467707 PON2Q15165 354 aa3.14□□□□□ -1.91
GAPVD1-211ENST00000467707 ZFP2Q6ZN57 461 aa3.14□□□□□ -1.91
GAPVD1-211ENST00000467707 PGAM4Q8N0Y7 254 aa3.14□□□□□ -1.91
GAPVD1-211ENST00000467707 ECHDC3Q96DC8 303 aa3.14□□□□□ -1.91
GAPVD1-211ENST00000467707 STARD4Q96DR4 205 aa3.14□□□□□ -1.91
GAPVD1-211ENST00000467707 PRRC1Q96M27 445 aa3.14□□□□□ -1.91
GAPVD1-211ENST00000467707 JSRP1Q96MG2 331 aaPredicted RBP3.14□□□□□ -1.91
GAPVD1-211ENST00000467707 ANP32EQ9BTT0 268 aa3.14□□□□□ -1.91
GAPVD1-211ENST00000467707 ANKRD60Q9BZ19 345 aa3.14□□□□□ -1.91
GAPVD1-211ENST00000467707 UBE2ZQ9H832 354 aaPredicted RBP3.14□□□□□ -1.91
GAPVD1-211ENST00000467707 CCNB1IP1Q9NPC3 277 aa3.14□□□□□ -1.91
GAPVD1-211ENST00000467707 TMEM9BQ9NQ34 198 aa3.14□□□□□ -1.91
GAPVD1-211ENST00000467707 IGKV2D-24A0A075B6R9 120 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 A0A1B0GVX0 72 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 A0A1W2PP18 115 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 OR6C74A6NCV1 312 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 LRRIQ4A6NIV6 560 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 ANKRD63C9JTQ0 380 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 CASC3O15234 703 aaKnown RBP3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 DNAJB6O75190 326 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 HLA-HP01893 362 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 IGKV3-11P04433 115 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 CISD3P0C7P0 127 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 TLX1NBP0CAT3 122 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 ERGP11308 486 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 IGFBP3P17936 291 aaPredicted RBP3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 GGT1P19440 569 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 RAB3AP20336 220 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 GSTM3P21266 225 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 RPS9P46781 194 aaKnown RBP3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 CRISP1P54107 249 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 UBE2NP61088 152 aaKnown RBP3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 CDH17Q12864 832 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 FAM71E1Q6IPT2 247 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 FBXW12Q6X9E4 464 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 OTUD6AQ7L8S5 288 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 OFCC1Q8IZS5 231 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 CYB561D1Q8N8Q1 229 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 CHST4Q8NCG5 386 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 BPIFCQ8NFQ6 507 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 OR5W2Q8NH69 310 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 NDFIP1Q9BT67 221 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 PLA2G2FQ9BZM2 168 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 MRPL22Q9NWU5 206 aaKnown RBP3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 RABL2AQ9UBK7 228 aaPredicted RBP3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 MROH7-TTC4A0A0A0MT08 1334 aa3.13□□□□□ -1.91
GAPVD1-211ENST00000467707 IGLV4-60A0A075B6I1 120 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms