RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 LPCAT4Q643R3 524 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 ACSM5Q6NUN0 579 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 LPCAT3Q6P1A2 487 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 FAHD2BQ6P2I3 314 aaPredicted RBP2.81□□□□□ -1.96
VPS13D-203ENST00000466732 CD300LGQ6UXG3 332 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 FAM151BQ6UXP7 276 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 NHLRC1Q6VVB1 395 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 SYVN1Q86TM6 617 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 ECHDC2Q86YB7 292 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 KLHDC8AQ8IYD2 350 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 FAM71AQ8IYT1 594 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 UBQLNLQ8IYU4 475 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 SLC22A18ASQ8N1D0 253 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 KDM8Q8N371 416 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 C12orf45Q8N5I9 185 aaPredicted RBP2.81□□□□□ -1.96
VPS13D-203ENST00000466732 PACRGLQ8N7B6 248 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 FAM86B1Q8N7N1 296 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 ZNF491Q8N8L2 437 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 STEAP2Q8NFT2 490 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 OR6M1Q8NGM8 313 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 OR1K1Q8NGR3 316 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 OR10T2Q8NGX3 314 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 OR2T3Q8NH03 318 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 ITFG1Q8TB96 612 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 GTSF1Q8WW33 167 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 DEDD2Q8WXF8 326 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 MRPL24Q96A35 216 aaKnown RBP2.81□□□□□ -1.96
VPS13D-203ENST00000466732 ESAMQ96AP7 390 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 FAHD2AQ96GK7 314 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 PCED1BQ96HM7 432 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 PPP1R16AQ96I34 528 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 SAMD8Q96LT4 415 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 RAB40CQ96S21 281 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 PLEKHF1Q96S99 279 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 DCUN1D5Q9BTE7 237 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 TSSK1BQ9BXA7 367 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 UCK2Q9BZX2 261 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 TRABDQ9H4I3 376 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 DYRK4Q9NR20 520 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 CHRAC1Q9NRG0 131 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 PLSCR3Q9NRY6 295 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 MED9Q9NWA0 146 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 ANAPC11Q9NYG5 84 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 PDP1Q9P0J1 537 aaPredicted RBP2.81□□□□□ -1.96
VPS13D-203ENST00000466732 RNF14Q9UBS8 474 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 Q9UF83 564 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 ARMCX3Q9UH62 379 aaPredicted RBP2.81□□□□□ -1.96
VPS13D-203ENST00000466732 OPN4Q9UHM6 478 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 ZNF225Q9UK10 706 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 SSR3Q9UNL2 185 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 POFUT2Q9Y2G5 429 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 PLEKHA6Q9Y2H5 1048 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 SF3B1O75533 1304 aaKnown RBP eCLIP2.81□□□□□ -1.96
VPS13D-203ENST00000466732 ARHGEF10O15013 1369 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.81□□□□□ -1.96
VPS13D-203ENST00000466732 IQGAP3Q86VI3 1631 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 ADCY10Q96PN6 1610 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 IFT172Q9UG01 1749 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 SIPA1L1O43166 1804 aa2.81□□□□□ -1.96
VPS13D-203ENST00000466732 PPLO60437 1756 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 SPHKAPQ2M3C7 1700 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 QRICH2Q9H0J4 1663 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 UNC13BO14795 1591 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 GLI2P10070 1586 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 CDC42BPGQ6DT37 1551 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 ABCC6O95255 1503 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 ATP7AQ04656 1500 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 A2MP01023 1474 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 ERVK-7P63135 1459 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 NSD3Q9BZ95 1437 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 TMEM2Q9UHN6 1383 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.8□□□□□ -1.96
VPS13D-203ENST00000466732 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.8□□□□□ -1.96
VPS13D-203ENST00000466732 FAM230AA0A1W2PPH8 454 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 A0A1W2PPV4 95 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 SMIM30A4D0T7 59 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 TRDCB7Z8K6 153 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 PRAMEF26H0Y7S4 382 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 H3BNH8 94 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 GYG2O15488 501 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 RAD1O60671 282 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 HCN1O60741 890 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 TBX19O60806 448 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 B4GALT2O60909 372 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 SUPT7LO94864 414 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 KCNK2O95069 426 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 GH1P01241 217 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 METTL15P1P0C7V9 234 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 SLC35E2BP0CK96 405 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 SLC35E2P0CK97 266 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 ZNF19P17023 458 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 ZNF25P17030 456 aaPredicted RBP2.8□□□□□ -1.96
VPS13D-203ENST00000466732 NELFEP18615 380 aaKnown RBP2.8□□□□□ -1.96
VPS13D-203ENST00000466732 DRD5P21918 477 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 FASP25445 335 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 UCP1P25874 307 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 DDTP30046 118 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 FMO3P31513 532 aa2.8□□□□□ -1.96
VPS13D-203ENST00000466732 OTX1P32242 354 aaPredicted RBP2.8□□□□□ -1.96
VPS13D-203ENST00000466732 MAS1LP35410 378 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms