RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 H3BNX3 289 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 H3BSA7 217 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 SGCEO43556 437 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 SYNGR3O43761 229 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 GPRIN2O60269 458 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 GPANK1O95872 356 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 IFNGP01579 166 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 BMP4P12644 408 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 FOSL1P15407 271 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 ZNF250P15622 560 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 APLNRP35414 380 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 WNT5AP41221 380 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 PPOXP50336 477 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 GDI2P50395 445 aaKnown RBP8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 UCP2P55851 309 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 SNRPD2P62316 118 aaKnown RBP8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 GALK2Q01415 458 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 TEKQ02763 1124 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 CRMP1Q14194 572 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 KPNB1Q14974 876 aaKnown RBP8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 PCK2Q16822 640 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 CCDC92Q53HC0 331 aaPredicted RBP8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 LINC01590Q5TEZ4 76 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 KDM4DQ6B0I6 523 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 KRT80Q6KB66 452 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 ACSM5Q6NUN0 579 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 ZNF774Q6NX45 483 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 ZFP1Q6P2D0 407 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 SVOPLQ8N434 492 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 ATG16L2Q8NAA4 619 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 CYB561A3Q8NBI2 242 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 OR2T4Q8NH00 348 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 ZNRF4Q8WWF5 429 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 LRTOMTQ8WZ04 291 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 CENPNQ96H22 339 aaPredicted RBP8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 FOXN4Q96NZ1 517 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 OSBPL10Q9BXB5 764 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 BCL2L14Q9BZR8 327 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 FN3KQ9H479 309 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 CDH20Q9HBT6 801 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 BARX1Q9HBU1 254 aaPredicted RBP8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 MRPL22Q9NWU5 206 aaKnown RBP8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 ASH2LQ9UBL3 628 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 CYB5R1Q9UHQ9 305 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 NDRG4Q9ULP0 352 aaKnown RBP8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 CMAHPQ9Y471 501 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 PMF1-BGLAPU3KQ54 211 aa8.15□□□□□ -1.1
SDCCAG3-208ENST00000466579 FLNAP21333 2647 aaKnown RBP8.15□□□□□ -1.11
SDCCAG3-208ENST00000466579 RIIAD1A6NNX1 92 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 G3V2T6 193 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 H3BN98 237 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 SURF4O15260 269 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 DOK2O60496 412 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 F12P00748 615 aaPredicted RBP8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 HMGN1P05114 100 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 CCL2P13500 99 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 ZNF3P17036 446 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 SPI1P17947 270 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 TUBG1P23258 451 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 RAD52P43351 418 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 CENPAP49450 140 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 EFNA4P52798 201 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 BLVRAP53004 296 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 CRISP1P54107 249 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 ESRRGP62508 458 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 GINS1Q14691 196 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 RAB35Q15286 201 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 MEP1BQ16820 701 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 TEX30Q5JUR7 227 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 SLC18B1Q6NT16 456 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 VHLLQ6RSH7 139 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 AMIGO2Q86SJ2 522 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 ZDHHC13Q8IUH4 622 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 C10orf67Q8IYJ2 551 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 ZNF101Q8IZC7 436 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 IQCF1Q8N6M8 205 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 GJC3Q8NFK1 279 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 IPCEF1Q8WWN9 437 aaPredicted RBP8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 PYDC1Q8WXC3 89 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 PTP4A1Q93096 173 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 DCLRE1CQ96SD1 692 aaKnown RBP8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 COQ7Q99807 217 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 MRPL37Q9BZE1 423 aaKnown RBP8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 HDHD2Q9H0R4 259 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 MARCH7Q9H992 704 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 PNRC2Q9NPJ4 139 aaKnown RBP8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 TUBG2Q9NRH3 451 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 PAPOLBQ9NRJ5 636 aaKnown RBP8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 TBCCD1Q9NVR7 557 aa8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 TMEFF2Q9UIK5 374 aaPredicted RBP8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 GDF2Q9UK05 429 aaPredicted RBP8.14□□□□□ -1.11
SDCCAG3-208ENST00000466579 C5orf49A4QMS7 147 aa8.13□□□□□ -1.11
SDCCAG3-208ENST00000466579 FAM171A2A8MVW0 826 aa8.13□□□□□ -1.11
SDCCAG3-208ENST00000466579 J3QW42 95 aa8.13□□□□□ -1.11
SDCCAG3-208ENST00000466579 RER1O15258 196 aa8.13□□□□□ -1.11
SDCCAG3-208ENST00000466579 NDUFS7O75251 213 aa8.13□□□□□ -1.11
SDCCAG3-208ENST00000466579 IGHV3-13P01766 116 aa8.13□□□□□ -1.11
SDCCAG3-208ENST00000466579 CD99P14209 185 aa8.13□□□□□ -1.11
SDCCAG3-208ENST00000466579 PYCR1P32322 319 aa8.13□□□□□ -1.11
SDCCAG3-208ENST00000466579 EFNB1P98172 346 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms