RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 SLC13A4Q9UKG4 626 aa4.15□□□□□ -1.75
EXOSC3-204ENST00000465860 BAG5Q9UL15 447 aa4.15□□□□□ -1.75
EXOSC3-204ENST00000465860 LAMP3Q9UQV4 416 aa4.15□□□□□ -1.75
EXOSC3-204ENST00000465860 ARL2BPQ9Y2Y0 163 aa4.15□□□□□ -1.75
EXOSC3-204ENST00000465860 RNF115Q9Y4L5 304 aa4.15□□□□□ -1.75
EXOSC3-204ENST00000465860 V9GYQ6 96 aa4.15□□□□□ -1.75
EXOSC3-204ENST00000465860 C2CD3Q4AC94 2353 aa4.15□□□□□ -1.75
EXOSC3-204ENST00000465860 SONP18583 2426 aaKnown RBP4.15□□□□□ -1.75
EXOSC3-204ENST00000465860 TRBV4-1A0A0J9YWV2 114 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 TRIM64A6NGJ6 449 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 TRIM64BA6NI03 449 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 MCIDASD6RGH6 385 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF587BE7ETH6 402 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 ATP6V1G2-DDX39BF2Z307 99 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 H3BUI4 141 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 H7C1C5 153 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 RNF13O43567 381 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 PDE5AO76074 875 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 LY6HO94772 140 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 SLC2A10O95528 541 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 FAM107AO95990 144 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 MT-ATP6P00846 226 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 HLA-HP01893 362 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 CECR9P0C854 216 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 PGA4P0DJD7 388 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 PGA3P0DJD8 388 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 UMPSP11172 480 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 IFI30P13284 250 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 HSD17B1P14061 328 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 B4GALT1P15291 398 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 ATP6V1B2P21281 511 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 AHCYP23526 432 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 GTF2E2P29084 291 aaKnown RBP4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 PPIFP30405 207 aaKnown RBP4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 GPR4P46093 362 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 CDH11P55287 796 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 LCN6P62502 163 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 RPS4XP62701 263 aaKnown RBP4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 HOXA4Q00056 320 aaPredicted RBP4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 FMODQ06828 376 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 C1DQ13901 141 aaKnown RBP4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 MFSD13AQ14CX5 517 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 HIST3H3Q16695 136 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 IFI44LQ53G44 452 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 Q5PR19 223 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 ARMC4Q5T2S8 1044 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 OTPQ5XKR4 325 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 OR7E24Q6IFN5 339 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 RGS7BPQ6MZT1 257 aaPredicted RBP4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 PODNL1Q6PEZ8 512 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 KLHL24Q6TFL4 600 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 C5orf46Q6UWT4 87 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 Q71RC1 249 aaPredicted RBP4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 ARPINQ7Z6K5 226 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 MDP1Q86V88 176 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 P2RY8Q86VZ1 359 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF584Q8IVC4 421 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 NRMQ8IXM6 262 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 OFCC1Q8IZS5 231 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 PGAM4Q8N0Y7 254 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 GPR137CQ8N3F9 429 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF611Q8N823 705 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 SCAIQ8N9R8 606 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 PNLDC1Q8NA58 520 aaKnown RBP4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 SYT14Q8NB59 555 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 OR13C2Q8NGS9 318 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 SLC7A13Q8TCU3 470 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 SMAP2Q8WU79 429 aaPredicted RBP4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 RASSF5Q8WWW0 418 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 LIPHQ8WWY8 451 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 HDAC2Q92769 488 aaKnown RBP4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 TMEM54Q969K7 222 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 FAM162AQ96A26 154 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 NMD3Q96D46 503 aaKnown RBP4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 BPIFA2Q96DR5 249 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 MUCL1Q96DR8 90 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 CMTM5Q96DZ9 223 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 SGTBQ96EQ0 304 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 MPP4Q96JB8 637 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 TNFRSF13CQ96RJ3 184 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF347Q96SE7 839 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 EPYCQ99645 322 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 TRAF4Q9BUZ4 470 aaPredicted RBP4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 MRPL13Q9BYD1 178 aaKnown RBP4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 SLC19A3Q9BZV2 496 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 ESRP2Q9H6T0 727 aaKnown RBP4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 EVA1AQ9H8M9 152 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 FKRPQ9H9S5 495 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 NMNAT1Q9HAN9 279 aaPredicted RBP4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 SPAG4Q9NPE6 437 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 FANCFQ9NPI8 374 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 BEX4Q9NWD9 120 aaPredicted RBP4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 VNN3Q9NY84 501 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 CISD1Q9NZ45 108 aaKnown RBP4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 CRNNQ9UBG3 495 aaPredicted RBP4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 IL20RAQ9UHF4 553 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 ZNF229Q9UJW7 825 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 MOKQ9UQ07 419 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 RCE1Q9Y256 329 aa4.14□□□□□ -1.75
EXOSC3-204ENST00000465860 ADAM18Q9Y3Q7 739 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms