RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 IL13RA1P78552 427 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 IGLV3-21P80748 117 aaPredicted RBP6.56□□□□□ -1.36
USP48-206ENST00000464577 MEP1BQ16820 701 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 ZNF260Q3ZCT1 412 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 C2orf27AQ580R0 203 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 GLYATL3Q5SZD4 288 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 CORO6Q6QEF8 472 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 UNQ6126/PRO20091Q6UXV3 157 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 CATSPERDQ86XM0 798 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 LYPD6Q86Y78 171 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 CSNK1A1LQ8N752 337 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 LINC00469Q8N7U9 141 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 NKAIN3Q8N8D7 197 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 OR4C3Q8NH37 302 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 ELP5Q8TE02 316 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 FAM3CQ92520 227 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 DCUN1D4Q92564 292 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 FAM131CQ96AQ9 280 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 SPACA7Q96KW9 195 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 CMSS1Q9BQ75 279 aaKnown RBP6.56□□□□□ -1.36
USP48-206ENST00000464577 NUDT16L1Q9BRJ7 211 aaKnown RBP6.56□□□□□ -1.36
USP48-206ENST00000464577 CFHR5Q9BXR6 569 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 EGLN1Q9GZT9 426 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 ZDHHC4Q9NPG8 344 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 RCC2Q9P258 522 aaKnown RBP6.56□□□□□ -1.36
USP48-206ENST00000464577 LPAR3Q9UBY5 353 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 SLC22A13Q9Y226 551 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 DTX4Q9Y2E6 619 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 RHBDD3Q9Y3P4 386 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 CSAG2Q9Y5P2 127 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 MRPS18BQ9Y676 258 aaKnown RBP6.56□□□□□ -1.36
USP48-206ENST00000464577 PTPRSQ13332 1948 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 A0A0B4J2A0 478 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 BLACEA4D250 179 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 A6NCN8 305 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 TMEM235A6NFC5 223 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 COLCA2A8K830 154 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 H3BSH0 61 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 LINC01387J3KSC0 135 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 SCAMP1O15126 338 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 EFSO43281 561 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 PLRG1O43660 514 aaKnown RBP6.56□□□□□ -1.36
USP48-206ENST00000464577 SCGNO76038 276 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 CT45A8P0DMV1 189 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 CT45A9P0DMV2 189 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 MAOAP21397 527 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 AVPR2P30518 371 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 RPS27P42677 84 aaKnown RBP6.56□□□□□ -1.36
USP48-206ENST00000464577 CAV2P51636 162 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 PGDP52209 483 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 RIDAP52758 137 aaKnown RBP6.56□□□□□ -1.36
USP48-206ENST00000464577 SRSF3P84103 164 aaKnown RBP6.56□□□□□ -1.36
USP48-206ENST00000464577 EGR4Q05215 589 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 ECH1Q13011 328 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 SKP2Q13309 424 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 HABP2Q14520 560 aaPredicted RBP6.56□□□□□ -1.36
USP48-206ENST00000464577 PEA15Q15121 130 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 TCEA2Q15560 299 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 MOGAT2Q3SYC2 334 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 CDNFQ49AH0 187 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 CT45A2Q5DJT8 189 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 FAM78AQ5JUQ0 283 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 ZNF776Q68DI1 518 aaPredicted RBP6.56□□□□□ -1.36
USP48-206ENST00000464577 KCTD18Q6PI47 426 aaPredicted RBP6.56□□□□□ -1.36
USP48-206ENST00000464577 TRAPPC6BQ86SZ2 158 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 FJX1Q86VR8 437 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 MISPQ8IVT2 679 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 C15orf54Q8N8G6 183 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 DTWD2Q8NBA8 298 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 OR6S1Q8NH40 331 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 ADAMTS17Q8TE56 1095 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 NUDCD2Q8WVJ2 157 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 OR1E3Q8WZA6 343 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 SMIM8Q96KF7 97 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 CMKLR1Q99788 373 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 ZNF251Q9BRH9 671 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 SYT4Q9H2B2 425 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 SHPKQ9UHJ6 478 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 RAB22AQ9UL26 194 aa6.56□□□□□ -1.36
USP48-206ENST00000464577 TBC1D3DA0A087WVF3 549 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 A0A0J9YY10 115 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 FAM221BA6H8Z2 402 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 METTL21EPA6NDL7 271 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 C2orf74A8MZ97 194 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 TBC1D3LB9A6J9 549 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 EEF1E1-BLOC1S5C9J1V9 151 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 UBE2CO00762 179 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 GPR37O15354 613 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 PNPP00491 289 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 TBC1D3HP0C7X1 549 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 LIPCP11150 499 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 SERPINF1P36955 418 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 PTGFRP43088 359 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 GPR3P46089 330 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 DNASE1L1P49184 302 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 GSK3AP49840 483 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 EIF5AP63241 154 aaKnown RBP6.55□□□□□ -1.36
USP48-206ENST00000464577 MFGE8Q08431 387 aaPredicted RBP6.55□□□□□ -1.36
USP48-206ENST00000464577 OR7A5Q15622 319 aa6.55□□□□□ -1.36
USP48-206ENST00000464577 SMAD2Q15796 467 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms