RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 FAHD2BQ6P2I3 314 aaPredicted RBP12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 FAM122BQ7Z309 247 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 TSEN54Q7Z6J9 526 aaKnown RBP12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 NPEPL1Q8NDH3 523 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 SLC7A13Q8TCU3 470 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 CCL17Q92583 94 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 FAHD2AQ96GK7 314 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 Q96M85 177 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 OCEL1Q9H607 264 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 ABCD2Q9UBJ2 740 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 RPS6KA6Q9UK32 745 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 ADAM18Q9Y3Q7 739 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 CACNG2Q9Y698 323 aa12.19□□□□□ -0.46
SNRNP40-203ENST00000463988 A0A0G2JMP0 313 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 TEX13CA0A0J9YWL9 993 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 A0A0X1KG70 313 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 H7C1C5 153 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 PTP4A3O75365 173 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 NDUFB2O95178 105 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 ABHD16AO95870 558 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 SCG5P05408 212 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 GSTM3P21266 225 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 GATA3P23771 443 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 MDH1P40925 334 aaKnown RBP12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 LCN6P62502 163 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 PSG7Q13046 419 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 CDK5R2Q13319 367 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 MESTQ5EB52 335 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 MTX3Q5HYI7 312 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 USP43Q70EL4 1123 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 TREML1Q86YW5 311 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 OR4M2Q8NGB6 313 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 ZNF418Q8TF45 676 aaPredicted RBP12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 FAM162AQ96A26 154 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 COG8Q96MW5 612 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 ZNF570Q96NI8 536 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 GPX7Q96SL4 187 aaPredicted RBP12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 KCTD14Q9BQ13 255 aaPredicted RBP12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 MED4Q9NPJ6 270 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 NRIP3Q9NQ35 241 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 SIGLEC7Q9Y286 467 aa12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 FAM32AQ9Y421 112 aaKnown RBP12.18□□□□□ -0.46
SNRNP40-203ENST00000463988 SGCEO43556 437 aa12.17□□□□□ -0.46
SNRNP40-203ENST00000463988 H1F0P07305 194 aaKnown RBP12.17□□□□□ -0.46
SNRNP40-203ENST00000463988 CTLA4P16410 223 aa12.17□□□□□ -0.46
SNRNP40-203ENST00000463988 RHCEP18577 417 aa12.17□□□□□ -0.46
SNRNP40-203ENST00000463988 SDHAP31040 664 aa12.17□□□□□ -0.46
SNRNP40-203ENST00000463988 LIMS1P48059 325 aa12.17□□□□□ -0.46
SNRNP40-203ENST00000463988 NUDT2P50583 147 aa12.17□□□□□ -0.46
SNRNP40-203ENST00000463988 LSM6P62312 80 aaKnown RBP12.17□□□□□ -0.46
SNRNP40-203ENST00000463988 AQP6Q13520 282 aa12.17□□□□□ -0.46
SNRNP40-203ENST00000463988 C1orf229Q6ZS94 237 aaPredicted RBP12.17□□□□□ -0.46
SNRNP40-203ENST00000463988 VASH1Q7L8A9 365 aaPredicted RBP12.17□□□□□ -0.46
SNRNP40-203ENST00000463988 PEG10Q86TG7 708 aaKnown RBP12.17□□□□□ -0.46
SNRNP40-203ENST00000463988 ADCK1Q86TW2 530 aa12.17□□□□□ -0.46
SNRNP40-203ENST00000463988 SEMA6DQ8NFY4 1073 aa12.17□□□□□ -0.46
SNRNP40-203ENST00000463988 CMTM5Q96DZ9 223 aa12.17□□□□□ -0.46
SNRNP40-203ENST00000463988 EMC7Q9NPA0 242 aa12.17□□□□□ -0.46
SNRNP40-203ENST00000463988 VSX1Q9NZR4 365 aaPredicted RBP12.17□□□□□ -0.46
SNRNP40-203ENST00000463988 NDUFAF4Q9P032 175 aa12.17□□□□□ -0.46
SNRNP40-203ENST00000463988 ATPIF1Q9UII2 106 aa12.17□□□□□ -0.46
SNRNP40-203ENST00000463988 J3QW42 95 aa12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 HAX1O00165 279 aa12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 TIMM8AO60220 97 aaPredicted RBP12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 DOK2O60496 412 aa12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 KHDRBS3O75525 346 aaKnown RBP12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 VENTXO95231 258 aa12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 TXNDC12O95881 172 aa12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 AVPP01185 164 aa12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 KITLGP21583 273 aa12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 TNFSF4P23510 183 aa12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 HTR5AP47898 357 aa12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 PSME3P61289 254 aa12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 KRR1Q13601 381 aaKnown RBP12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 C1QL2Q7Z5L3 287 aa12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 GLB1L2Q8IW92 636 aa12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 HAVCR1Q96D42 359 aa12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 FAM46AQ96IP4 442 aaKnown RBP12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 C7orf34Q96L11 122 aa12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 DHRS1Q96LJ7 313 aa12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 GAL3ST1Q99999 423 aa12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 TMPRSS13Q9BYE2 586 aa12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 MSL2Q9HCI7 577 aa12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 KRCC1Q9NPI7 259 aaPredicted RBP12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 DCAF13Q9NV06 445 aaKnown RBP12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 PURGQ9UJV8 347 aaKnown RBP12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 SAMD4AQ9UPU9 718 aaKnown RBP12.16□□□□□ -0.46
SNRNP40-203ENST00000463988 PPIAL4EA0A075B759 164 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 PPIAL4CA0A0B4J2A2 164 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 OR6C6A6NF89 314 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 PPIAL4DF5H284 164 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 SLC16A7O60669 478 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 PPIAL4FP0DN26 164 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 NCK1P16333 377 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 TNFRSF1AP19438 455 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 EPHA1P21709 976 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 PRDX6P30041 224 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 OMPP47874 163 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 HILS1P60008 231 aa12.15□□□□□ -0.46
SNRNP40-203ENST00000463988 TNFAIP6P98066 277 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms