RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 TECTAO75443 2155 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 LOC105371242A0A075B767 164 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 A0A087WUJ7 227 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 TMEM269A0A1B0GVZ9 245 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 TMEM129A0AVI4 362 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 FAM221AA4D161 298 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 NAP1L6A6NFF2 107 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 NPIPA2E9PIF3 369 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 FAM72CH0Y354 149 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 K7EP13 123 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF208O43345 1280 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 XRCC3O43542 346 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 NME2P1O60361 137 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 RPP14O95059 124 aaKnown RBP3.26□□□□□ -1.89
COL8A1-205ENST00000463753 TSPAN15O95858 294 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 HPRT1P00492 218 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 OPN1MWP04001 364 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 ATP1B1P05026 303 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 CD5P06127 495 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 H1F0P07305 194 aaKnown RBP3.26□□□□□ -1.89
COL8A1-205ENST00000463753 OPN1MW2P0DN77 364 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 OPN1MW3P0DN78 364 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 F3P13726 295 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 PNLIPP16233 465 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF7P17097 686 aaPredicted RBP3.26□□□□□ -1.89
COL8A1-205ENST00000463753 ATF1P18846 271 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 TACR1P25103 407 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 HSD3B2P26439 372 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 IGFALSP35858 605 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 ACVR1BP36896 505 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 SLC11A1P49279 550 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 CRYBA2P53672 197 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 CLDN12P56749 244 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 OR12D2P58182 307 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 TPI1P60174 286 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 WDR5P61964 334 aaKnown RBP3.26□□□□□ -1.89
COL8A1-205ENST00000463753 RPS14P62263 151 aaKnown RBP3.26□□□□□ -1.89
COL8A1-205ENST00000463753 PITX1P78337 314 aaPredicted RBP3.26□□□□□ -1.89
COL8A1-205ENST00000463753 SLAQ13239 276 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 IQCJQ1A5X6 159 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF311Q5JNZ3 666 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 TMEM69Q5SWH9 247 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 FAM72AQ5TYM5 149 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 C1orf189Q5VU69 101 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 EIF5AL1Q6IS14 154 aaKnown RBP3.26□□□□□ -1.89
COL8A1-205ENST00000463753 FAM72DQ6L9T8 149 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 VWA1Q6PCB0 445 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 Q6ZRG5 221 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 WDR5BQ86VZ2 330 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 FAM72BQ86X60 149 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 CMTM4Q8IZR5 234 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 NPWQ8N729 165 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 LRRC52Q8N7C0 313 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 GMCL1P1Q8NEA9 526 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 PLPP5Q8NEB5 264 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 OR5M8Q8NGP6 311 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 MFSD8Q8NHS3 518 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 ABHD5Q8WTS1 349 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 ASB17Q8WXJ9 295 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 HAS2Q92819 552 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 DVL3Q92997 716 aaPredicted RBP3.26□□□□□ -1.89
COL8A1-205ENST00000463753 ECHDC3Q96DC8 303 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 VWCEQ96DN2 955 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 SLC25A38Q96DW6 304 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 BOD1Q96IK1 185 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 TECTBQ96PL2 329 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 KLHDC3Q9BQ90 382 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 SYT3Q9BQG1 590 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 PBDC1Q9BVG4 233 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 TTTY10Q9BZA0 68 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF700Q9H0M5 742 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 S1PR5Q9H228 398 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 SYT4Q9H2B2 425 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 ZDHHC6Q9H6R6 413 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 CAPN10Q9HC96 672 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 AGO4Q9HCK5 861 aaKnown RBP3.26□□□□□ -1.89
COL8A1-205ENST00000463753 KCNJ16Q9NPI9 418 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 PNO1Q9NRX1 252 aaKnown RBP3.26□□□□□ -1.89
COL8A1-205ENST00000463753 ACER3Q9NUN7 267 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 CRIM1Q9NZV1 1036 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 KCNE5Q9UJ90 142 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 AK6Q9Y3D8 172 aaKnown RBP3.26□□□□□ -1.89
COL8A1-205ENST00000463753 SNX10Q9Y5X0 201 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 FLVCR1Q9Y5Y0 555 aa3.26□□□□□ -1.89
COL8A1-205ENST00000463753 A0A0C4DFX4 3053 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 YJEFN3A6XGL0 299 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 GPR89AB7ZAQ6 455 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 TMPRSS2O15393 492 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 IRAK2O43187 625 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 GNG7O60262 68 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 TSPAN2O60636 221 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 FCMRO60667 390 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 TBX18O95935 607 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 ICAM1P05362 532 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 CD14P08571 375 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 CTXN2P0C2S0 81 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 OR5G3P0C626 314 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 GPR89BP0CG08 455 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 ACP2P11117 423 aa3.25□□□□□ -1.89
COL8A1-205ENST00000463753 ADH5P11766 374 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms