RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 C1orf146Q5VVC0 180 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 SHQ1Q6PI26 577 aaKnown RBP11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 HIST2H3AQ71DI3 136 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 OR6V1Q8N148 313 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 SVOPLQ8N434 492 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 SLC26A10Q8NG04 563 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 OR8D4Q8NGM9 314 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 AKR7LQ8NHP1 331 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 UTP4Q969X6 686 aaKnown RBP11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 COG8Q96MW5 612 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 RHNO1Q9BSD3 238 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 PLA2G12AQ9BZM1 189 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 MS4A5Q9H3V2 200 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 DYNLRB1Q9NP97 96 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 SLCO1C1Q9NYB5 712 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 IGLV3-9A0A075B6K5 115 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 NDUFS8O00217 210 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 GPRIN2O60269 458 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 TP53P04637 393 aaPredicted RBP11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 SCG5P05408 212 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 SLC25A16P16260 332 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 CLEC12AQ5QGZ9 265 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 PAQR4Q8N4S7 273 aaPredicted RBP11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 GJC3Q8NFK1 279 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 OR10H5Q8NGA6 315 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 MRPL37Q9BZE1 423 aaKnown RBP11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 HDHD2Q9H0R4 259 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 RPRD1BQ9NQG5 326 aaKnown RBP11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 POLR1DQ9Y2S0 133 aa11.24□□□□□ -0.61
R3HDM1-213ENST00000463230 LOC100509620A0A075B734 347 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 C5orf49A4QMS7 147 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 OR6C68A6NDL8 312 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 OR6C6A6NF89 314 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 RIIAD1A6NNX1 92 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 H7C1Q1 480 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 M0R233 179 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 DOK2O60496 412 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 RGS6P49758 472 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 KLF3P57682 345 aaPredicted RBP11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 PPP1R8Q12972 351 aaKnown RBP11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 TNK1Q13470 666 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 ATP6AP1Q15904 470 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 ZNF774Q6NX45 483 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 UGT2A3Q6UWM9 527 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 VASH1Q7L8A9 365 aaPredicted RBP11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 SDR9C7Q8NEX9 313 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 SYNPRQ8TBG9 265 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 SORCS2Q96PQ0 1159 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 COQ7Q99807 217 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 NIPSNAP1Q9BPW8 284 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 RERGLQ9H628 205 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 CMC2Q9NRP2 79 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 TBCCD1Q9NVR7 557 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 REV1Q9UBZ9 1251 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 CGGBP1Q9UFW8 167 aaPredicted RBP11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 DCTN6O00399 190 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 SSX4O60224 188 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 NDUFS7O75251 213 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 ZNF3P17036 446 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 PDLIM4P50479 330 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 ECH1Q13011 328 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 ZNF362Q5T0B9 420 aaPredicted RBP11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 TMEM179BQ7Z7N9 219 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 C10orf67Q8IYJ2 551 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 SLC37A3Q8NCC5 494 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 OR4Q3Q8NH05 313 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 OR5K1Q8NHB7 308 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 TEX12Q9BXU0 123 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 NMNAT2Q9BZQ4 307 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 SRA1Q9HD15 236 aaKnown RBP11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 ASH2LQ9UBL3 628 aa11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 FLNAP21333 2647 aaKnown RBP11.23□□□□□ -0.61
R3HDM1-213ENST00000463230 TRIM64A6NGJ6 449 aa11.22□□□□□ -0.61
R3HDM1-213ENST00000463230 TRIM64BA6NI03 449 aa11.22□□□□□ -0.61
R3HDM1-213ENST00000463230 EBAG9O00559 213 aa11.22□□□□□ -0.61
R3HDM1-213ENST00000463230 MT-ND5P03915 603 aa11.22□□□□□ -0.61
R3HDM1-213ENST00000463230 HMGN1P05114 100 aa11.22□□□□□ -0.61
R3HDM1-213ENST00000463230 LCKP06239 509 aa11.22□□□□□ -0.61
R3HDM1-213ENST00000463230 FAM157BP0CG42 384 aa11.22□□□□□ -0.61
R3HDM1-213ENST00000463230 OSMP13725 252 aa11.22□□□□□ -0.61
R3HDM1-213ENST00000463230 HTR5AP47898 357 aa11.22□□□□□ -0.61
R3HDM1-213ENST00000463230 TEKQ02763 1124 aa11.22□□□□□ -0.61
R3HDM1-213ENST00000463230 ZNF718Q3SXZ3 478 aa11.22□□□□□ -0.61
R3HDM1-213ENST00000463230 SLC35F1Q5T1Q4 408 aa11.22□□□□□ -0.61
R3HDM1-213ENST00000463230 MBNL2Q5VZF2 373 aaKnown RBP11.22□□□□□ -0.61
R3HDM1-213ENST00000463230 HIPK1Q86Z02 1210 aa11.22□□□□□ -0.61
R3HDM1-213ENST00000463230 OR1F12Q8NHA8 337 aa11.22□□□□□ -0.61
R3HDM1-213ENST00000463230 FAM168AQ92567 244 aa11.22□□□□□ -0.61
R3HDM1-213ENST00000463230 C4orf45Q96LM5 186 aa11.22□□□□□ -0.61
R3HDM1-213ENST00000463230 TSSK2Q96PF2 358 aa11.22□□□□□ -0.61
R3HDM1-213ENST00000463230 VRK1Q99986 396 aaPredicted RBP11.22□□□□□ -0.61
R3HDM1-213ENST00000463230 RBM4Q9BWF3 364 aaKnown RBP11.22□□□□□ -0.61
R3HDM1-213ENST00000463230 REG4Q9BYZ8 158 aa11.22□□□□□ -0.61
R3HDM1-213ENST00000463230 PLEK2Q9NYT0 353 aa11.22□□□□□ -0.61
R3HDM1-213ENST00000463230 AP4S1Q9Y587 144 aa11.22□□□□□ -0.61
R3HDM1-213ENST00000463230 SOX14O95416 240 aa11.21□□□□□ -0.61
R3HDM1-213ENST00000463230 IGHV3-13P01766 116 aa11.21□□□□□ -0.61
R3HDM1-213ENST00000463230 CCL2P13500 99 aa11.21□□□□□ -0.61
R3HDM1-213ENST00000463230 FASP25445 335 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms