RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 RAB1CQ92928 201 aa7.71□□□□□ -1.18
DDX39B-216ENST00000462421 SPTSSAQ969W0 71 aa7.71□□□□□ -1.18
DDX39B-216ENST00000462421 C7orf34Q96L11 122 aa7.71□□□□□ -1.18
DDX39B-216ENST00000462421 DHRS1Q96LJ7 313 aa7.71□□□□□ -1.18
DDX39B-216ENST00000462421 SAMD8Q96LT4 415 aa7.71□□□□□ -1.18
DDX39B-216ENST00000462421 DCLRE1CQ96SD1 692 aaKnown RBP7.71□□□□□ -1.18
DDX39B-216ENST00000462421 PITX2Q99697 317 aa7.71□□□□□ -1.18
DDX39B-216ENST00000462421 HCAR1Q9BXC0 346 aa7.71□□□□□ -1.18
DDX39B-216ENST00000462421 HDHD2Q9H0R4 259 aa7.71□□□□□ -1.18
DDX39B-216ENST00000462421 EMC7Q9NPA0 242 aa7.71□□□□□ -1.18
DDX39B-216ENST00000462421 NRIP3Q9NQ35 241 aa7.71□□□□□ -1.18
DDX39B-216ENST00000462421 RPRD1BQ9NQG5 326 aaKnown RBP7.71□□□□□ -1.18
DDX39B-216ENST00000462421 ASH2LQ9UBL3 628 aa7.71□□□□□ -1.18
DDX39B-216ENST00000462421 KCNG2Q9UJ96 466 aa7.71□□□□□ -1.18
DDX39B-216ENST00000462421 COA3Q9Y2R0 106 aaPredicted RBP7.71□□□□□ -1.18
DDX39B-216ENST00000462421 CDH10Q9Y6N8 788 aa7.71□□□□□ -1.18
DDX39B-216ENST00000462421 PRRC2AP48634 2157 aaKnown RBP7.71□□□□□ -1.18
DDX39B-216ENST00000462421 DHRS12A0PJE2 317 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 ISPDA4D126 451 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 AQP12BA6NM10 295 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 CLDN25C9JDP6 229 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 INAFM1C9JVW0 142 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 J3QW42 95 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 SPRY3O43610 288 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 DNAJC8O75937 253 aaPredicted RBP7.7□□□□□ -1.18
DDX39B-216ENST00000462421 PRSS23O95084 383 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 NAT2P11245 290 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 TNFRSF1AP19438 455 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 SRP14P37108 136 aaKnown RBP7.7□□□□□ -1.18
DDX39B-216ENST00000462421 LIMS1P48059 325 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 SLC6A9P48067 706 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 MRPS11P82912 194 aaKnown RBP7.7□□□□□ -1.18
DDX39B-216ENST00000462421 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.7□□□□□ -1.18
DDX39B-216ENST00000462421 MAD2L1BPQ15013 274 aaPredicted RBP7.7□□□□□ -1.18
DDX39B-216ENST00000462421 FXNQ16595 210 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 TSTQ16762 297 aaKnown RBP7.7□□□□□ -1.18
DDX39B-216ENST00000462421 SPATA46Q5T0L3 261 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 ZNF774Q6NX45 483 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 RINLQ6ZS11 566 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 AQP12AQ8IXF9 295 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 ZNF786Q8N393 782 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 SDR9C7Q8NEX9 313 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 OR10G2Q8NGC3 310 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 OR52E2Q8NGJ4 325 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 OR4K13Q8NH42 304 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 GIPC3Q8TF64 312 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 RAB39BQ96DA2 213 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 FOXN4Q96NZ1 517 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 SNX18Q96RF0 628 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 DOK1Q99704 481 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 BPESC1Q9GZL8 116 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 SP140LQ9H930 580 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 SRA1Q9HD15 236 aaKnown RBP7.7□□□□□ -1.18
DDX39B-216ENST00000462421 ZNF224Q9NZL3 707 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 VSX1Q9NZR4 365 aaPredicted RBP7.7□□□□□ -1.18
DDX39B-216ENST00000462421 ATPIF1Q9UII2 106 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 ZDHHC8Q9ULC8 765 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 PCDHB10Q9UN67 800 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 U3KQV3 271 aa7.7□□□□□ -1.18
DDX39B-216ENST00000462421 ITPR3Q14573 2671 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 IGHV1-69-2A0A0G2JMI3 117 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 C17orf100A8MU93 164 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 ARPC3O15145 178 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 LY6HO94772 140 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 TXNDC12O95881 172 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 TGFAP01135 160 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 TFP02787 698 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 MMP7P09237 267 aaPredicted RBP7.69□□□□□ -1.18
DDX39B-216ENST00000462421 IRF2P14316 349 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 ZNF250P15622 560 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 CTLA4P16410 223 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 ZNF16P17020 682 aaPredicted RBP7.69□□□□□ -1.18
DDX39B-216ENST00000462421 ZNF23P17027 643 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 POU1F1P28069 291 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 SLC15A1P46059 708 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 TPTEP56180 551 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 TMEM33P57088 247 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 COX10Q12887 443 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 SEC23BQ15437 767 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 MICAQ29983 383 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 MST1LQ2TV78 715 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 ELFN2Q5R3F8 820 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 SLC35F1Q5T1Q4 408 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 SLC27A4Q6P1M0 643 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 NHLRC1Q6VVB1 395 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 ZNF620Q6ZNG0 422 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 RASSF6Q6ZTQ3 369 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 GLCCI1Q86VQ1 547 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 CLDN22Q8N7P3 220 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 ATG16L2Q8NAA4 619 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 LRRC75AQ8NAA5 344 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 OR6K6Q8NGW6 343 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 OR1F12Q8NHA8 337 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 SLC25A40Q8TBP6 338 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 ST7LQ8TDW4 575 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 HPS1Q92902 700 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 NABP1Q96AH0 204 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 APOBEC3DQ96AK3 386 aaPredicted RBP7.69□□□□□ -1.18
DDX39B-216ENST00000462421 POM121L2Q96KW2 1035 aa7.69□□□□□ -1.18
DDX39B-216ENST00000462421 ZNF582Q96NG8 517 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 669.3 ms