RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 MRPS24Q96EL2 167 aaKnown RBP8.24□□□□□ -1.09
BRCA1-205ENST00000461221 HCFC1R1Q9NWW0 138 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 DCAF16Q9NXF7 216 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 COA3Q9Y2R0 106 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-205ENST00000461221 CCSO14618 274 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 COX7A2P2O60397 106 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 CIDEAO60543 219 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 CYBAP13498 195 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 JUNBP17275 347 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-205ENST00000461221 ALOX5APP20292 161 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 RPUSD3Q6P087 351 aaKnown RBP8.24□□□□□ -1.09
BRCA1-205ENST00000461221 SLCO4C1Q6ZQN7 724 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 ZNF573Q86YE8 665 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 TMEM123Q8N131 208 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 ZNF511Q8NB15 262 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 P2RY12Q9H244 342 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 CXorf36Q9H7Y0 433 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 C12orf10Q9HB07 376 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 LYRM4Q9HD34 91 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 PPP1R3CQ9UQK1 317 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 A0A0U1RQS6 177 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 TMEM129A0AVI4 362 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 LRRC3CA6NJW4 275 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 GNB2P62879 340 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 NCR3LG1Q68D85 454 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 LCN15Q6UWW0 184 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 DLK2Q6UY11 383 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 FA2HQ7L5A8 372 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 MARCH3Q86UD3 253 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 LRRTM1Q86UE6 522 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 EDAQ92838 391 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 OPALINQ96PE5 141 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 SMIM7Q9BQ49 75 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 CABLES2Q9BTV7 478 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 MRPL22Q9NWU5 206 aaKnown RBP8.24□□□□□ -1.09
BRCA1-205ENST00000461221 CGGBP1Q9UFW8 167 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-205ENST00000461221 SLC17A4Q9Y2C5 497 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 TEX50A0A1B0GTY4 177 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 OR2A25A4D2G3 310 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 OR2J3O76001 311 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 SLC25A6P12236 298 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 CCL11P51671 97 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 RPS16P62249 146 aaKnown RBP8.24□□□□□ -1.09
BRCA1-205ENST00000461221 SLC17A1Q14916 467 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 TMEM97Q5BJF2 176 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 DRAM2Q6UX65 266 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 OR51F2Q8NH61 342 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 GPX8Q8TED1 209 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 FBXW5Q969U6 566 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 CMTM3Q96MX0 182 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 OR5M11Q96RB7 305 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 HDAC8Q9BY41 377 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 GLIPR2Q9H4G4 154 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 CHST11Q9NPF2 352 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 TAS2R4Q9NYW5 299 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 ZNF835Q9Y2P0 537 aa8.24□□□□□ -1.09
BRCA1-205ENST00000461221 A0A1B0GTW7 788 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 A0A1B0GX78 115 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 G3V3Y1 287 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 XRCC2O43543 280 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 SSSCA1O60232 199 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 CNMDO75829 334 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 F10P00742 488 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 CYC1P08574 325 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 MMP7P09237 267 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-205ENST00000461221 RRASP10301 218 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 HNF1AP20823 631 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 ABCD3P28288 659 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 MPGP29372 298 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 DOC2BQ14184 412 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 NANOGP1Q8N7R0 232 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 UBAC2Q8NBM4 344 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 ARRDC2Q8TBH0 407 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 SLC35B4Q969S0 331 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 ISL2Q96A47 359 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 UBQLN3Q9H347 655 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 BANF2Q9H503 90 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 ATP23Q9Y6H3 246 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 KAT6AQ92794 2004 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 CAMTA1Q9Y6Y1 1673 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 LOC107986453A0A1B0GWG9 222 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 ACSM4P0C7M7 580 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 APEHP13798 732 aaKnown RBP8.23□□□□□ -1.09
BRCA1-205ENST00000461221 CD1CP29017 333 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 SEMA3BQ13214 749 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 ASAH1Q13510 395 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 SLC38A6Q8IZM9 456 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 C11orf42Q8N5U0 333 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 OR2T6Q8NHC8 308 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 ZNF596Q8TC21 504 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 SLC25A46Q96AG3 418 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 RPUSD4Q96CM3 377 aaKnown RBP8.23□□□□□ -1.09
BRCA1-205ENST00000461221 GPR78Q96P69 363 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 SLC46A2Q9BY10 475 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 ZDHHC11Q9H8X9 412 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 ZMAT3Q9HA38 289 aaKnown RBP8.23□□□□□ -1.09
BRCA1-205ENST00000461221 USP22Q9UPT9 525 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 TUBAL3A6NHL2 446 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 PPP6CO00743 305 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 ST8SIA5O15466 376 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms