RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ARFGEF1Q9Y6D6 1849 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 COL18A1P39060 1754 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 LAMB2P55268 1798 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 KIAA1551Q9HCM1 1747 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 RTL9Q8NET4 1388 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 TNRQ92752 1358 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 ZNF532Q9HCE3 1301 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 CICQ96RK0 1608 aaPredicted RBP2.28□□□□□ -2.04
HPS3-203ENST00000460822 GSTTP1A0A1W2PQM5 241 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 A0A1W2PRD5 423 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 CCL21O00585 134 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 MBTPS2O43462 519 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 SOX15O60248 233 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 HLA-HP01893 362 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 KRT16P08779 473 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 STSP08842 583 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 OR8U8P0C7N1 319 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 PMCHP20382 165 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 CCNE1P24864 410 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 SHMT2P34897 504 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 NPBWR2P48146 333 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 ATP5J2P56134 94 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 FBXW4P57775 412 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 GPX6P59796 221 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 CYTH1Q15438 398 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 OR5M10Q6IEU7 315 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 TTC23LQ6PF05 361 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 MBOAT1Q6ZNC8 495 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 ACOT7LQ6ZUV0 252 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 FRA10AC1Q70Z53 315 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 APRG1Q8IVJ8 170 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 CMTM1Q8IZ96 169 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 FAM9CQ8IZT9 166 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 SLC39A11Q8N1S5 342 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 LYPD6BQ8NI32 183 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 ACTRT1Q8TDG2 376 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 MYDGFQ969H8 173 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 CMTM7Q96FZ5 175 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 HSFY1Q96LI6 401 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 OR8B4Q96RC9 309 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 VGLL1Q99990 258 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 ECSITQ9BQ95 431 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 RNF126Q9BV68 326 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 HINT2Q9BX68 163 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 ACTR3CQ9C0K3 210 aaPredicted RBP2.28□□□□□ -2.04
HPS3-203ENST00000460822 ACTR6Q9GZN1 396 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 NSRP1Q9H0G5 558 aaKnown RBP2.28□□□□□ -2.04
HPS3-203ENST00000460822 BEX1Q9HBH7 125 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 RETNQ9HD89 108 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 PRSS16Q9NQE7 514 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 ADAM22Q9P0K1 906 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 DPM3Q9P2X0 92 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 CTSFQ9UBX1 484 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 TAF1LQ8IZX4 1826 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 SHANK3Q9BYB0 1731 aa2.28□□□□□ -2.05
HPS3-203ENST00000460822 SCN7AQ01118 1682 aa2.28□□□□□ -2.05
HPS3-203ENST00000460822 CDK5RAP2Q96SN8 1893 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 ABCB11O95342 1321 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 IGKV1D-8A0A087WSZ0 117 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 A0A1B0GVG6 124 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 PDZK1P1A8MUH7 402 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 PGRMC1O00264 195 aaKnown RBP2.27□□□□□ -2.05
HPS3-203ENST00000460822 PI15O43692 258 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 EIF4E2O60573 245 aaKnown RBP2.27□□□□□ -2.05
HPS3-203ENST00000460822 SMIM24O75264 130 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 PLEKHA8P1O95397 391 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 IGHV3-13P01766 116 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 FGGP02679 453 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 SHBGP04278 402 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 PCCAP05165 728 aaPredicted RBP2.27□□□□□ -2.05
HPS3-203ENST00000460822 FGF1P05230 155 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 C2P06681 752 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 NR2C1P13056 603 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 PGAM2P15259 253 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 IGLL1P15814 213 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 MGMTP16455 207 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 HOXB8P17481 243 aaPredicted RBP2.27□□□□□ -2.05
HPS3-203ENST00000460822 FASP25445 335 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 GABRR2P28476 465 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 ALDH3A1P30838 453 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 FOXN2P32314 431 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 KIR2DS2P43631 304 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 RGRP47804 291 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 GPM6AP51674 278 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 PLK1P53350 603 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 MAP3K7CLP57077 242 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 UBE2MP61081 183 aaKnown RBP2.27□□□□□ -2.05
HPS3-203ENST00000460822 PSMC5P62195 406 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 CXCL6P80162 114 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 ASAH1Q13510 395 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 ARL6IP1Q15041 203 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 ANGPT1Q15389 498 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 KCTD19Q17RG1 926 aaPredicted RBP2.27□□□□□ -2.05
HPS3-203ENST00000460822 PARP15Q460N3 678 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 CXCL17Q6UXB2 119 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 ZNF497Q6ZNH5 498 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 RBM45Q8IUH3 476 aaKnown RBP2.27□□□□□ -2.05
HPS3-203ENST00000460822 KIF2BQ8N4N8 673 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 OR56A4Q8NGH8 313 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 OR5B3Q8NH48 314 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms