RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 HIST1H2BAQ96A08 127 aa13.97□□□□□ -0.17
SSR4-206ENST00000460616 DCBLD2Q96PD2 775 aa13.97□□□□□ -0.17
SSR4-206ENST00000460616 PRMT8Q9NR22 394 aaPredicted RBP13.97□□□□□ -0.17
SSR4-206ENST00000460616 METTL1Q9UBP6 276 aaKnown RBP13.97□□□□□ -0.17
SSR4-206ENST00000460616 OR1A2Q9Y585 309 aa13.97□□□□□ -0.17
SSR4-206ENST00000460616 A0A087WV62 115 aa13.96□□□□□ -0.17
SSR4-206ENST00000460616 A0A1W2PPE3 182 aa13.96□□□□□ -0.17
SSR4-206ENST00000460616 TACR3P29371 465 aa13.96□□□□□ -0.17
SSR4-206ENST00000460616 MEF2DQ14814 521 aa13.96□□□□□ -0.17
SSR4-206ENST00000460616 OR10K2Q6IF99 312 aa13.96□□□□□ -0.17
SSR4-206ENST00000460616 FAM166AQ6J272 317 aa13.96□□□□□ -0.17
SSR4-206ENST00000460616 PAPD4Q6PIY7 484 aaKnown RBP13.96□□□□□ -0.17
SSR4-206ENST00000460616 SLC29A4Q7RTT9 530 aa13.96□□□□□ -0.17
SSR4-206ENST00000460616 ZNF584Q8IVC4 421 aa13.96□□□□□ -0.17
SSR4-206ENST00000460616 ZC3H10Q96K80 434 aaKnown RBP13.96□□□□□ -0.17
SSR4-206ENST00000460616 MICU1Q9BPX6 476 aa13.96□□□□□ -0.17
SSR4-206ENST00000460616 NAA11Q9BSU3 229 aaPredicted RBP13.96□□□□□ -0.17
SSR4-206ENST00000460616 LAT2Q9GZY6 243 aa13.96□□□□□ -0.17
SSR4-206ENST00000460616 POLE3Q9NRF9 147 aa13.96□□□□□ -0.17
SSR4-206ENST00000460616 TMEM74BQ9NUR3 256 aa13.96□□□□□ -0.17
SSR4-206ENST00000460616 ZNF107Q9UII5 783 aaPredicted RBP13.96□□□□□ -0.17
SSR4-206ENST00000460616 DAPP1Q9UN19 280 aa13.96□□□□□ -0.17
SSR4-206ENST00000460616 MUC22E2RYF6 1773 aaPredicted RBP13.96□□□□□ -0.18
SSR4-206ENST00000460616 PRRT4C9JH25 899 aa13.96□□□□□ -0.18
SSR4-206ENST00000460616 AGAP20933 346 aa13.96□□□□□ -0.18
SSR4-206ENST00000460616 MAP3K8P41279 467 aa13.96□□□□□ -0.18
SSR4-206ENST00000460616 RPS27P42677 84 aaKnown RBP13.96□□□□□ -0.18
SSR4-206ENST00000460616 DMWDQ09019 674 aa13.96□□□□□ -0.18
SSR4-206ENST00000460616 ETV3LQ6ZN32 361 aa13.96□□□□□ -0.18
SSR4-206ENST00000460616 DPY19L4Q7Z388 723 aa13.96□□□□□ -0.18
SSR4-206ENST00000460616 OR6N2Q8NGY6 317 aa13.96□□□□□ -0.18
SSR4-206ENST00000460616 NUBPLQ8TB37 319 aa13.96□□□□□ -0.18
SSR4-206ENST00000460616 SAT2Q96F10 170 aaPredicted RBP13.96□□□□□ -0.18
SSR4-206ENST00000460616 RRNAD1Q96FB5 475 aaKnown RBP13.96□□□□□ -0.18
SSR4-206ENST00000460616 SERINC2Q96SA4 455 aa13.96□□□□□ -0.18
SSR4-206ENST00000460616 RNF126Q9BV68 326 aa13.96□□□□□ -0.18
SSR4-206ENST00000460616 TEX101Q9BY14 249 aa13.96□□□□□ -0.18
SSR4-206ENST00000460616 KLK13Q9UKR3 277 aa13.96□□□□□ -0.18
SSR4-206ENST00000460616 SCN3AQ9NY46 2000 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 PMS2P1A4D2B8 440 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 IGLON5A6NGN9 336 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 WRBO00258 174 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 DCTN6O00399 190 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 B3GALT2O43825 422 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 ERCC1P07992 297 aaPredicted RBP13.95□□□□□ -0.18
SSR4-206ENST00000460616 ZNF14P17017 642 aaPredicted RBP13.95□□□□□ -0.18
SSR4-206ENST00000460616 AKR1C4P17516 323 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 CPT2P23786 658 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 KIR3DL2P43630 455 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 RNASE10Q5GAN6 216 aaKnown RBP13.95□□□□□ -0.18
SSR4-206ENST00000460616 GLYATL3Q5SZD4 288 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 ZNF550Q7Z398 422 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 EXD3Q8N9H8 876 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 PAPOLGQ9BWT3 736 aaKnown RBP13.95□□□□□ -0.18
SSR4-206ENST00000460616 A0A087WUJ7 227 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 TRBV6-7A0A0A0MS04 114 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 TTLL8A6PVC2 850 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 MT-ND4LP03901 98 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 SLC35G6P0C7Q6 338 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 PRF1P14222 555 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 RCC1P18754 421 aaPredicted RBP13.95□□□□□ -0.18
SSR4-206ENST00000460616 ALOX5APP20292 161 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 HTR2CP28335 458 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 SERPINF1P36955 418 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 AKR1C3P42330 323 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 RPS4XP62701 263 aaKnown RBP13.95□□□□□ -0.18
SSR4-206ENST00000460616 EGR3Q06889 387 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 PMPCAQ10713 525 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 WDR38Q5JTN6 314 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 ACER2Q5QJU3 275 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 ZNF585AQ6P3V2 769 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 THRSPQ92748 146 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 C4orf45Q96LM5 186 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 SYT4Q9H2B2 425 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 WDR76Q9H967 626 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 SLC2A8Q9NY64 477 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 SLC22A7Q9Y694 548 aa13.95□□□□□ -0.18
SSR4-206ENST00000460616 FITM1A5D6W6 292 aa13.94□□□□□ -0.18
SSR4-206ENST00000460616 DOK2O60496 412 aa13.94□□□□□ -0.18
SSR4-206ENST00000460616 MAOAP21397 527 aa13.94□□□□□ -0.18
SSR4-206ENST00000460616 ELAVL3Q14576 367 aaKnown RBP13.94□□□□□ -0.18
SSR4-206ENST00000460616 HNRNPA1L2Q32P51 320 aaKnown RBP13.94□□□□□ -0.18
SSR4-206ENST00000460616 ITPRIPL2Q3MIP1 535 aa13.94□□□□□ -0.18
SSR4-206ENST00000460616 CORO6Q6QEF8 472 aa13.94□□□□□ -0.18
SSR4-206ENST00000460616 TMEFF1Q8IYR6 380 aa13.94□□□□□ -0.18
SSR4-206ENST00000460616 ZDHHC22Q8N966 263 aa13.94□□□□□ -0.18
SSR4-206ENST00000460616 ZSCAN4Q8NAM6 433 aaPredicted RBP13.94□□□□□ -0.18
SSR4-206ENST00000460616 TCTEX1D2Q8WW35 142 aa13.94□□□□□ -0.18
SSR4-206ENST00000460616 MRGPRFQ96AM1 343 aa13.94□□□□□ -0.18
SSR4-206ENST00000460616 SMIM8Q96KF7 97 aa13.94□□□□□ -0.18
SSR4-206ENST00000460616 GPX7Q96SL4 187 aaPredicted RBP13.94□□□□□ -0.18
SSR4-206ENST00000460616 SULT4A1Q9BR01 284 aa13.94□□□□□ -0.18
SSR4-206ENST00000460616 RPS10P5Q9NQ39 176 aa13.94□□□□□ -0.18
SSR4-206ENST00000460616 OR2S2Q9NQN1 319 aa13.94□□□□□ -0.18
SSR4-206ENST00000460616 MRPS33Q9Y291 106 aaKnown RBP13.94□□□□□ -0.18
SSR4-206ENST00000460616 WIF1Q9Y5W5 379 aa13.94□□□□□ -0.18
SSR4-206ENST00000460616 TBC1D3IA0A087WXS9 549 aa13.93□□□□□ -0.18
SSR4-206ENST00000460616 TMEM235A6NFC5 223 aa13.93□□□□□ -0.18
SSR4-206ENST00000460616 ZNF860A6NHJ4 632 aa13.93□□□□□ -0.18
SSR4-206ENST00000460616 FGF17O60258 216 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms