RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 PPP1R3DO95685 299 aa16.13■□□□□ 0.17
COL5A1-203ENST00000460264 NGFP01138 241 aa16.13■□□□□ 0.17
COL5A1-203ENST00000460264 COX5BP10606 129 aa16.13■□□□□ 0.17
COL5A1-203ENST00000460264 GCH1P30793 250 aa16.13■□□□□ 0.17
COL5A1-203ENST00000460264 RPS6KA3P51812 740 aa16.13■□□□□ 0.17
COL5A1-203ENST00000460264 CDH15P55291 814 aa16.13■□□□□ 0.17
COL5A1-203ENST00000460264 AQP6Q13520 282 aa16.13■□□□□ 0.17
COL5A1-203ENST00000460264 IL17RELQ6ZVW7 336 aa16.13■□□□□ 0.17
COL5A1-203ENST00000460264 GLB1L2Q8IW92 636 aa16.13■□□□□ 0.17
COL5A1-203ENST00000460264 C1orf174Q8IYL3 243 aa16.13■□□□□ 0.17
COL5A1-203ENST00000460264 FITM2Q8N6M3 262 aa16.13■□□□□ 0.17
COL5A1-203ENST00000460264 C1orf159Q96HA4 380 aa16.13■□□□□ 0.17
COL5A1-203ENST00000460264 C4orf45Q96LM5 186 aa16.13■□□□□ 0.17
COL5A1-203ENST00000460264 RACGAP1Q9H0H5 632 aa16.13■□□□□ 0.17
COL5A1-203ENST00000460264 RERGLQ9H628 205 aa16.13■□□□□ 0.17
COL5A1-203ENST00000460264 ELOVL3Q9HB03 270 aa16.13■□□□□ 0.17
COL5A1-203ENST00000460264 COA3Q9Y2R0 106 aaPredicted RBP16.13■□□□□ 0.17
COL5A1-203ENST00000460264 DNHD1Q96M86 4753 aa16.13■□□□□ 0.17
COL5A1-203ENST00000460264 PPIHO43447 177 aaKnown RBP16.12■□□□□ 0.17
COL5A1-203ENST00000460264 SGCEO43556 437 aa16.12■□□□□ 0.17
COL5A1-203ENST00000460264 MPZL1O95297 269 aa16.12■□□□□ 0.17
COL5A1-203ENST00000460264 FPR3P25089 353 aa16.12■□□□□ 0.17
COL5A1-203ENST00000460264 RRM2P31350 389 aa16.12■□□□□ 0.17
COL5A1-203ENST00000460264 CDKN2AP42771 156 aaKnown RBP16.12■□□□□ 0.17
COL5A1-203ENST00000460264 HTR5AP47898 357 aa16.12■□□□□ 0.17
COL5A1-203ENST00000460264 ZNF81P51508 661 aa16.12■□□□□ 0.17
COL5A1-203ENST00000460264 MMP15P51511 669 aa16.12■□□□□ 0.17
COL5A1-203ENST00000460264 MNAT1P51948 309 aa16.12■□□□□ 0.17
COL5A1-203ENST00000460264 TMEM33P57088 247 aa16.12■□□□□ 0.17
COL5A1-203ENST00000460264 OTPQ5XKR4 325 aa16.12■□□□□ 0.17
COL5A1-203ENST00000460264 VASH1Q7L8A9 365 aaPredicted RBP16.12■□□□□ 0.17
COL5A1-203ENST00000460264 CXXC5Q7LFL8 322 aaKnown RBP16.12■□□□□ 0.17
COL5A1-203ENST00000460264 ZDHHC21Q8IVQ6 265 aa16.12■□□□□ 0.17
COL5A1-203ENST00000460264 LINC01356Q8N9X3 169 aa16.12■□□□□ 0.17
COL5A1-203ENST00000460264 CLDND2Q8NHS1 167 aa16.12■□□□□ 0.17
COL5A1-203ENST00000460264 ERMAPQ96PL5 475 aaPredicted RBP16.12■□□□□ 0.17
COL5A1-203ENST00000460264 CCT8L2Q96SF2 557 aa16.12■□□□□ 0.17
COL5A1-203ENST00000460264 NUAK2Q9H093 628 aa16.12■□□□□ 0.17
COL5A1-203ENST00000460264 OR52D1Q9H346 318 aa16.12■□□□□ 0.17
COL5A1-203ENST00000460264 NARFLQ9H6Q4 476 aa16.12■□□□□ 0.17
COL5A1-203ENST00000460264 PLSCR5A0PG75 271 aa16.11■□□□□ 0.17
COL5A1-203ENST00000460264 ZSCAN5BA6NJL1 495 aa16.11■□□□□ 0.17
COL5A1-203ENST00000460264 WNT9BO14905 357 aa16.11■□□□□ 0.17
COL5A1-203ENST00000460264 OR10H3O60404 316 aa16.11■□□□□ 0.17
COL5A1-203ENST00000460264 CDC14BO60729 498 aa16.11■□□□□ 0.17
COL5A1-203ENST00000460264 ABHD16AO95870 558 aa16.11■□□□□ 0.17
COL5A1-203ENST00000460264 SRD5A1P18405 259 aa16.11■□□□□ 0.17
COL5A1-203ENST00000460264 HNF1AP20823 631 aa16.11■□□□□ 0.17
COL5A1-203ENST00000460264 ATP6V1B2P21281 511 aa16.11■□□□□ 0.17
COL5A1-203ENST00000460264 SLC6A6P31641 620 aa16.11■□□□□ 0.17
COL5A1-203ENST00000460264 GSSP48637 474 aa16.11■□□□□ 0.17
COL5A1-203ENST00000460264 ARHGDIAP52565 204 aa16.11■□□□□ 0.17
COL5A1-203ENST00000460264 LSM6P62312 80 aaKnown RBP16.11■□□□□ 0.17
COL5A1-203ENST00000460264 CR1LQ2VPA4 569 aa16.11■□□□□ 0.17
COL5A1-203ENST00000460264 RFX4Q33E94 735 aa16.11■□□□□ 0.17
COL5A1-203ENST00000460264 ARL9Q6T311 187 aa16.11■□□□□ 0.17
COL5A1-203ENST00000460264 TSSK2Q96PF2 358 aa16.11■□□□□ 0.17
COL5A1-203ENST00000460264 PLEK2Q9NYT0 353 aa16.11■□□□□ 0.17
COL5A1-203ENST00000460264 ACTR3BQ9P1U1 418 aa16.11■□□□□ 0.17
COL5A1-203ENST00000460264 ASH2LQ9UBL3 628 aa16.11■□□□□ 0.17
COL5A1-203ENST00000460264 IGHV1-69-2A0A0G2JMI3 117 aa16.1■□□□□ 0.17
COL5A1-203ENST00000460264 OR6C6A6NF89 314 aa16.1■□□□□ 0.17
COL5A1-203ENST00000460264 DCTN6O00399 190 aa16.1■□□□□ 0.17
COL5A1-203ENST00000460264 TPD52L2O43399 206 aaKnown RBP16.1■□□□□ 0.17
COL5A1-203ENST00000460264 IGHV1-46P01743 117 aa16.1■□□□□ 0.17
COL5A1-203ENST00000460264 GAAP10253 952 aa16.1■□□□□ 0.17
COL5A1-203ENST00000460264 IFNGR2P38484 337 aa16.1■□□□□ 0.17
COL5A1-203ENST00000460264 CRYBB2P43320 205 aa16.1■□□□□ 0.17
COL5A1-203ENST00000460264 KCNMB1Q16558 191 aa16.1■□□□□ 0.17
COL5A1-203ENST00000460264 TSTQ16762 297 aaKnown RBP16.1■□□□□ 0.17
COL5A1-203ENST00000460264 FAM209AQ5JX71 171 aa16.1■□□□□ 0.17
COL5A1-203ENST00000460264 DNM1P34Q6PK57 102 aa16.1■□□□□ 0.17
COL5A1-203ENST00000460264 CYP2R1Q6VVX0 501 aa16.1■□□□□ 0.17
COL5A1-203ENST00000460264 USP51Q70EK9 711 aa16.1■□□□□ 0.17
COL5A1-203ENST00000460264 SAP30LQ9HAJ7 183 aa16.1■□□□□ 0.17
COL5A1-203ENST00000460264 DECR2Q9NUI1 292 aa16.1■□□□□ 0.17
COL5A1-203ENST00000460264 TBCCD1Q9NVR7 557 aa16.1■□□□□ 0.17
COL5A1-203ENST00000460264 CGGBP1Q9UFW8 167 aaPredicted RBP16.1■□□□□ 0.17
COL5A1-203ENST00000460264 TMCC3Q9ULS5 477 aa16.1■□□□□ 0.17
COL5A1-203ENST00000460264 STAB1Q9NY15 2570 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 IGLV1-36A0A0B4J1U3 117 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 B2RBV5 119 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 ARPC3O15145 178 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 SPRY3O43610 288 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 GPANK1O95872 356 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 FAM107AO95990 144 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 TFP02787 698 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 ADH4P08319 380 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 CRABP1P29762 137 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 TEKQ02763 1124 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 C1orf94Q6P1W5 598 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 PGBD2Q6P3X8 592 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 LEG1Q6P5S2 330 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 ZNF620Q6ZNG0 422 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 NPEPL1Q8NDH3 523 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 SLC7A6Q92536 515 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 SAMD8Q96LT4 415 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 IFT27Q9BW83 186 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 POFUT1Q9H488 388 aa16.09■□□□□ 0.17
COL5A1-203ENST00000460264 CYSLTR2Q9NS75 346 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms