RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 TEX43Q6ZNM6 134 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 SCD5Q86SK9 330 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 OFCC1Q8IZS5 231 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 GABRG1Q8N1C3 465 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 CSGALNACT2Q8N6G5 542 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 MARCH1Q8TCQ1 289 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 LKAAEAR1Q8TD35 194 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 CAPSLQ8WWF8 208 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 ECHDC3Q96DC8 303 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 MSANTD3Q96H12 275 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 DNAJC1Q96KC8 554 aaKnown RBP3.57□□□□□ -1.84
CCDC50-203ENST00000460064 CEP170P1Q96L14 293 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 SPACA1Q9HBV2 294 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 LYARQ9NX58 379 aaKnown RBP3.57□□□□□ -1.84
CCDC50-203ENST00000460064 MAPK8IP3Q9UPT6 1336 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 LOC100506127A0A0U1RQW1 187 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 RSPH10B2B2RC85 870 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 SPECC1L-ADORA2AF8WAN1 911 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 AKR7A2O43488 359 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 ICOSLGO75144 302 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 CRYGCP07315 174 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 ERCC1P07992 297 aaPredicted RBP3.56□□□□□ -1.84
CCDC50-203ENST00000460064 RSPH10BP0C881 870 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 OR8G3PP0DMU2 310 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 BCKDHBP21953 392 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 OMGP23515 440 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 DCKP27707 260 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 HTR2BP41595 481 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 CDKN2BP42772 138 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 CYB561P49447 251 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 UBE2AP49459 152 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 MYL6P60660 151 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 STXBP1P61764 594 aaKnown RBP3.56□□□□□ -1.84
CCDC50-203ENST00000460064 XIAPP98170 497 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 MXD1Q05195 221 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 XRCC4Q13426 336 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 SF3A2Q15428 464 aaKnown RBP3.56□□□□□ -1.84
CCDC50-203ENST00000460064 POU2AF1Q16633 256 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 Q3ZCU0 254 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 PTPN20Q4JDL3 420 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 PIP5KL1Q5T9C9 394 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 SPECC1LQ69YQ0 1117 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 TTC19Q6DKK2 380 aaPredicted RBP3.56□□□□□ -1.84
CCDC50-203ENST00000460064 TMEM53Q6P2H8 277 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 TTC23LQ6PF05 361 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 TMEM220Q6QAJ8 160 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 SSX9Q7RTT3 188 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 HDDC2Q7Z4H3 204 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 CMC1Q7Z7K0 106 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 STPG2Q8N412 459 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 LYPD6BQ8NI32 183 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 ISG20Q96AZ6 181 aaKnown RBP3.56□□□□□ -1.84
CCDC50-203ENST00000460064 ZNF707Q96C28 371 aaPredicted RBP3.56□□□□□ -1.84
CCDC50-203ENST00000460064 DUS3LQ96G46 650 aaKnown RBP3.56□□□□□ -1.84
CCDC50-203ENST00000460064 PRRC1Q96M27 445 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 NSRP1Q9H0G5 558 aaKnown RBP3.56□□□□□ -1.84
CCDC50-203ENST00000460064 NEUROG2Q9H2A3 272 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 LINC00597Q9H2U6 94 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 TMEM165Q9HC07 324 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 C20orf96Q9NUD7 363 aaPredicted RBP3.56□□□□□ -1.84
CCDC50-203ENST00000460064 ST3GAL6Q9Y274 331 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 ARHGAP21Q5T5U3 1957 aa3.56□□□□□ -1.84
CCDC50-203ENST00000460064 TEX46H3BTG2 121 aa3.55□□□□□ -1.84
CCDC50-203ENST00000460064 EIF4E2O60573 245 aaKnown RBP3.55□□□□□ -1.84
CCDC50-203ENST00000460064 HMOX2P30519 316 aa3.55□□□□□ -1.84
CCDC50-203ENST00000460064 MAS1LP35410 378 aa3.55□□□□□ -1.84
CCDC50-203ENST00000460064 CEACAM6P40199 344 aa3.55□□□□□ -1.84
CCDC50-203ENST00000460064 NKAIN1Q4KMZ8 207 aa3.55□□□□□ -1.84
CCDC50-203ENST00000460064 HES5Q5TA89 166 aa3.55□□□□□ -1.84
CCDC50-203ENST00000460064 TSPO2Q5TGU0 170 aa3.55□□□□□ -1.84
CCDC50-203ENST00000460064 TWF2Q6IBS0 349 aaKnown RBP3.55□□□□□ -1.84
CCDC50-203ENST00000460064 ERICH5Q6P6B1 374 aa3.55□□□□□ -1.84
CCDC50-203ENST00000460064 TIFABQ6ZNK6 161 aa3.55□□□□□ -1.84
CCDC50-203ENST00000460064 PCP2Q8IVA1 136 aa3.55□□□□□ -1.84
CCDC50-203ENST00000460064 ZNF786Q8N393 782 aa3.55□□□□□ -1.84
CCDC50-203ENST00000460064 Q8N976 141 aa3.55□□□□□ -1.84
CCDC50-203ENST00000460064 ZNF565Q8N9K5 539 aa3.55□□□□□ -1.84
CCDC50-203ENST00000460064 OR4S2Q8NH73 311 aa3.55□□□□□ -1.84
CCDC50-203ENST00000460064 ZFP90Q8TF47 636 aa3.55□□□□□ -1.84
CCDC50-203ENST00000460064 DDI1Q8WTU0 396 aa3.55□□□□□ -1.84
CCDC50-203ENST00000460064 SRSF12Q8WXF0 261 aaKnown RBP3.55□□□□□ -1.84
CCDC50-203ENST00000460064 NRGNQ92686 78 aa3.55□□□□□ -1.84
CCDC50-203ENST00000460064 C8orf44Q96CB5 159 aa3.55□□□□□ -1.84
CCDC50-203ENST00000460064 PLA2G2FQ9BZM2 168 aa3.55□□□□□ -1.84
CCDC50-203ENST00000460064 CYP3A43Q9HB55 503 aa3.55□□□□□ -1.84
CCDC50-203ENST00000460064 NRBP2Q9NSY0 501 aa3.55□□□□□ -1.84
CCDC50-203ENST00000460064 RBAKQ9NYW8 714 aaPredicted RBP3.55□□□□□ -1.84
CCDC50-203ENST00000460064 CCDC59Q9P031 241 aaKnown RBP3.55□□□□□ -1.84
CCDC50-203ENST00000460064 MTCL1Q9Y4B5 1905 aaKnown RBP3.54□□□□□ -1.84
CCDC50-203ENST00000460064 KIF27Q86VH2 1401 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 INSRP06213 1382 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 TRBV9A0A0B4J1U6 114 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 H0YHG0 523 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 NUPL2O15504 423 aaKnown RBP3.54□□□□□ -1.84
CCDC50-203ENST00000460064 CHST1O43916 411 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 CLDN11O75508 207 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 CBR3O75828 277 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 CCNB2O95067 398 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 PRPS2P11908 318 aa3.54□□□□□ -1.84
CCDC50-203ENST00000460064 TUBG1P23258 451 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms