RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 NUP50Q9UKX7 468 aa18.18■□□□□ 0.5
CPNE1-220ENST00000458038 AUP1Q9Y679 476 aa18.18■□□□□ 0.5
CPNE1-220ENST00000458038 A0A1W2PPL8 197 aa18.17■□□□□ 0.5
CPNE1-220ENST00000458038 IFNL4K9M1U5 179 aa18.17■□□□□ 0.5
CPNE1-220ENST00000458038 FXYD1O00168 92 aa18.17■□□□□ 0.5
CPNE1-220ENST00000458038 ZFP36P26651 326 aaKnown RBP18.17■□□□□ 0.5
CPNE1-220ENST00000458038 SLC9A3P48764 834 aa18.17■□□□□ 0.5
CPNE1-220ENST00000458038 SELENOWP63302 87 aa18.17■□□□□ 0.5
CPNE1-220ENST00000458038 SCRN3Q0VDG4 424 aa18.17■□□□□ 0.5
CPNE1-220ENST00000458038 ENDOGQ14249 297 aaKnown RBP18.17■□□□□ 0.5
CPNE1-220ENST00000458038 MAPRE2Q15555 327 aa18.17■□□□□ 0.5
CPNE1-220ENST00000458038 ARMCX4Q5H9R4 360 aa18.17■□□□□ 0.5
CPNE1-220ENST00000458038 OAFQ86UD1 273 aa18.17■□□□□ 0.5
CPNE1-220ENST00000458038 RNF113BQ8IZP6 322 aaKnown RBP18.17■□□□□ 0.5
CPNE1-220ENST00000458038 FAM156AQ8NDB6 213 aa18.17■□□□□ 0.5
CPNE1-220ENST00000458038 DEFB108BQ8NET1 73 aa18.17■□□□□ 0.5
CPNE1-220ENST00000458038 POLE4Q9NR33 117 aa18.17■□□□□ 0.5
CPNE1-220ENST00000458038 GID8Q9NWU2 228 aa18.17■□□□□ 0.5
CPNE1-220ENST00000458038 PLEK2Q9NYT0 353 aa18.17■□□□□ 0.5
CPNE1-220ENST00000458038 IL19Q9UHD0 177 aa18.17■□□□□ 0.5
CPNE1-220ENST00000458038 EGFL7Q9UHF1 273 aa18.17■□□□□ 0.5
CPNE1-220ENST00000458038 A4GNTQ9UNA3 340 aa18.17■□□□□ 0.5
CPNE1-220ENST00000458038 KITLGP21583 273 aa18.16■□□□□ 0.5
CPNE1-220ENST00000458038 PRTN3P24158 256 aa18.16■□□□□ 0.5
CPNE1-220ENST00000458038 SLC6A9P48067 706 aa18.16■□□□□ 0.5
CPNE1-220ENST00000458038 PRKCDQ05655 676 aa18.16■□□□□ 0.5
CPNE1-220ENST00000458038 ZNF154Q13106 437 aa18.16■□□□□ 0.5
CPNE1-220ENST00000458038 PRR31Q5SQ13 230 aa18.16■□□□□ 0.5
CPNE1-220ENST00000458038 LRRC75AQ8NAA5 344 aa18.16■□□□□ 0.5
CPNE1-220ENST00000458038 PCYOX1LQ8NBM8 494 aa18.16■□□□□ 0.5
CPNE1-220ENST00000458038 C22orf15Q8WYQ4 148 aa18.16■□□□□ 0.5
CPNE1-220ENST00000458038 TPD52L3Q96J77 140 aa18.16■□□□□ 0.5
CPNE1-220ENST00000458038 DCLRE1CQ96SD1 692 aaKnown RBP18.16■□□□□ 0.5
CPNE1-220ENST00000458038 MRI1Q9BV20 369 aa18.16■□□□□ 0.5
CPNE1-220ENST00000458038 ZNF696Q9H7X3 374 aa18.16■□□□□ 0.5
CPNE1-220ENST00000458038 PPP1R3CQ9UQK1 317 aa18.16■□□□□ 0.5
CPNE1-220ENST00000458038 PPIAL4AQ9Y536 164 aa18.16■□□□□ 0.5
CPNE1-220ENST00000458038 A8MXK9 166 aa18.15■□□□□ 0.5
CPNE1-220ENST00000458038 MRASO14807 208 aa18.15■□□□□ 0.5
CPNE1-220ENST00000458038 PIP5K1CO60331 668 aa18.15■□□□□ 0.5
CPNE1-220ENST00000458038 ZNF12P17014 697 aa18.15■□□□□ 0.5
CPNE1-220ENST00000458038 BTG1P62324 171 aa18.15■□□□□ 0.5
CPNE1-220ENST00000458038 LRRC23Q53EV4 343 aaPredicted RBP18.15■□□□□ 0.5
CPNE1-220ENST00000458038 ZNF771Q7L3S4 317 aaPredicted RBP18.15■□□□□ 0.5
CPNE1-220ENST00000458038 OFCC1Q8IZS5 231 aa18.15■□□□□ 0.5
CPNE1-220ENST00000458038 CLDN22Q8N7P3 220 aa18.15■□□□□ 0.5
CPNE1-220ENST00000458038 SIGLECL1Q8N7X8 197 aa18.15■□□□□ 0.5
CPNE1-220ENST00000458038 OR2Z1Q8NG97 314 aa18.15■□□□□ 0.5
CPNE1-220ENST00000458038 OR51A7Q8NH64 312 aa18.15■□□□□ 0.5
CPNE1-220ENST00000458038 HAVCR1Q96D42 359 aa18.15■□□□□ 0.5
CPNE1-220ENST00000458038 FNDC11Q9BVV2 318 aa18.15■□□□□ 0.5
CPNE1-220ENST00000458038 NDEL1Q9GZM8 345 aa18.15■□□□□ 0.5
CPNE1-220ENST00000458038 AP3M1Q9Y2T2 418 aa18.15■□□□□ 0.5
CPNE1-220ENST00000458038 INSIG2Q9Y5U4 225 aa18.15■□□□□ 0.5
CPNE1-220ENST00000458038 EFCAB9A8MZ26 197 aa18.14■□□□□ 0.49
CPNE1-220ENST00000458038 FAM220BPB1ANY3 271 aa18.14■□□□□ 0.49
CPNE1-220ENST00000458038 J3QW42 95 aa18.14■□□□□ 0.49
CPNE1-220ENST00000458038 XKRYO14609 159 aa18.14■□□□□ 0.49
CPNE1-220ENST00000458038 SGCEO43556 437 aa18.14■□□□□ 0.49
CPNE1-220ENST00000458038 MDH2P40926 338 aaKnown RBP18.14■□□□□ 0.49
CPNE1-220ENST00000458038 TRAM2Q15035 370 aa18.14■□□□□ 0.49
CPNE1-220ENST00000458038 ESCO2Q56NI9 601 aa18.14■□□□□ 0.49
CPNE1-220ENST00000458038 SPRNQ5BIV9 151 aa18.14■□□□□ 0.49
CPNE1-220ENST00000458038 SLC27A4Q6P1M0 643 aa18.14■□□□□ 0.49
CPNE1-220ENST00000458038 NRMQ8IXM6 262 aa18.14■□□□□ 0.49
CPNE1-220ENST00000458038 MUC20Q8N307 709 aaPredicted RBP18.14■□□□□ 0.49
CPNE1-220ENST00000458038 OR2T12Q8NG77 320 aa18.14■□□□□ 0.49
CPNE1-220ENST00000458038 PTP4A1Q93096 173 aa18.14■□□□□ 0.49
CPNE1-220ENST00000458038 MMP26Q9NRE1 261 aa18.14■□□□□ 0.49
CPNE1-220ENST00000458038 GRHPRQ9UBQ7 328 aa18.14■□□□□ 0.49
CPNE1-220ENST00000458038 IL20RAQ9UHF4 553 aa18.14■□□□□ 0.49
CPNE1-220ENST00000458038 PCDHGB1Q9Y5G3 927 aa18.14■□□□□ 0.49
CPNE1-220ENST00000458038 TRAV27A0A087WT01 109 aa18.13■□□□□ 0.49
CPNE1-220ENST00000458038 F5H0A9 414 aaPredicted RBP18.13■□□□□ 0.49
CPNE1-220ENST00000458038 TRAPPC2LH3BP13 241 aa18.13■□□□□ 0.49
CPNE1-220ENST00000458038 TMPRSS2O15393 492 aa18.13■□□□□ 0.49
CPNE1-220ENST00000458038 DOK2O60496 412 aa18.13■□□□□ 0.49
CPNE1-220ENST00000458038 PPIAL4GP0DN37 164 aa18.13■□□□□ 0.49
CPNE1-220ENST00000458038 HTR5AP47898 357 aa18.13■□□□□ 0.49
CPNE1-220ENST00000458038 FHL1Q13642 323 aa18.13■□□□□ 0.49
CPNE1-220ENST00000458038 IGFN1Q86VF2 1251 aa18.13■□□□□ 0.49
CPNE1-220ENST00000458038 MICU2Q8IYU8 434 aa18.13■□□□□ 0.49
CPNE1-220ENST00000458038 ACOT11Q8WXI4 607 aaPredicted RBP18.13■□□□□ 0.49
CPNE1-220ENST00000458038 CMBLQ96DG6 245 aa18.13■□□□□ 0.49
CPNE1-220ENST00000458038 LRCH1Q9Y2L9 728 aa18.13■□□□□ 0.49
CPNE1-220ENST00000458038 ELOVL7A1L3X0 281 aa18.12■□□□□ 0.49
CPNE1-220ENST00000458038 IFNW1P05000 195 aa18.12■□□□□ 0.49
CPNE1-220ENST00000458038 CD14P08571 375 aa18.12■□□□□ 0.49
CPNE1-220ENST00000458038 RAC2P15153 192 aa18.12■□□□□ 0.49
CPNE1-220ENST00000458038 RPL4P36578 427 aaKnown RBP18.12■□□□□ 0.49
CPNE1-220ENST00000458038 RGS6P49758 472 aa18.12■□□□□ 0.49
CPNE1-220ENST00000458038 GUCY1A3Q02108 690 aa18.12■□□□□ 0.49
CPNE1-220ENST00000458038 KLF10Q13118 480 aa18.12■□□□□ 0.49
CPNE1-220ENST00000458038 AQP6Q13520 282 aa18.12■□□□□ 0.49
CPNE1-220ENST00000458038 ZMYND11Q15326 602 aa18.12■□□□□ 0.49
CPNE1-220ENST00000458038 Q6ZR03 302 aa18.12■□□□□ 0.49
CPNE1-220ENST00000458038 SLC25A28Q96A46 364 aa18.12■□□□□ 0.49
CPNE1-220ENST00000458038 TMEM120AQ9BXJ8 343 aa18.12■□□□□ 0.49
CPNE1-220ENST00000458038 DCAF16Q9NXF7 216 aa18.12■□□□□ 0.49
CPNE1-220ENST00000458038 ZNF69Q9UC07 566 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms