RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 FAM3DQ96BQ1 224 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 CHIAQ9BZP6 476 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 SLC17A5Q9NRA2 495 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 R4GMQ9 66 aa16.46■□□□□ 0.23
SEMA3B-209ENST00000456560 TRBV11-1A0A0K0K1C0 115 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 NPIPA5E9PKD4 350 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 G3V3Q6 166 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 ONECUT2O95948 504 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 TSPAN5P62079 268 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 FMODQ06828 376 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 GUSBP11Q6P575 273 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 CHMP1BQ7LBR1 199 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 PIGKQ92643 395 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 GSX2Q9BZM3 304 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 CHST11Q9NPF2 352 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 NPIPA1Q9UND3 350 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 PCDHGA5Q9Y5G8 931 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 SDK1Q7Z5N4 2213 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 LOC100289279A0A1B0GTE1 492 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 A0A1W2PPL8 197 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 CPED1A4D0V7 1026 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 VSTM2BA6NLU5 285 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 SCRG1O75711 98 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 RBBP9O75884 186 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 HRGP04196 525 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 FSTP19883 344 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 EPHA8P29322 1005 aaPredicted RBP16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 DAP3P51398 398 aaKnown RBP16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 DCDP81605 110 aaKnown RBP16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 FOXF1Q12946 379 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 ZNF385CQ66K41 422 aaPredicted RBP16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 DNM1P34Q6PK57 102 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 ST7LQ8TDW4 575 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 G6PC2Q9NQR9 355 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 RDH8Q9NYR8 311 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 SIT1Q9Y3P8 196 aa16.45■□□□□ 0.22
SEMA3B-209ENST00000456560 WDFY4Q6ZS81 3184 aa16.44■□□□□ 0.22
SEMA3B-209ENST00000456560 FREM3P0C091 2139 aa16.44■□□□□ 0.22
SEMA3B-209ENST00000456560 IGKV1D-43A0A0B4J1Z2 117 aa16.44■□□□□ 0.22
SEMA3B-209ENST00000456560 EFNA2O43921 213 aa16.44■□□□□ 0.22
SEMA3B-209ENST00000456560 IL5P05113 134 aa16.44■□□□□ 0.22
SEMA3B-209ENST00000456560 EMP2P54851 167 aa16.44■□□□□ 0.22
SEMA3B-209ENST00000456560 CCL7P80098 99 aa16.44■□□□□ 0.22
SEMA3B-209ENST00000456560 OR1J4Q8NGS1 313 aa16.44■□□□□ 0.22
SEMA3B-209ENST00000456560 RBPMSQ93062 196 aaKnown RBP16.44■□□□□ 0.22
SEMA3B-209ENST00000456560 PMEPA1Q969W9 287 aa16.44■□□□□ 0.22
SEMA3B-209ENST00000456560 DDIT4LQ96D03 193 aa16.44■□□□□ 0.22
SEMA3B-209ENST00000456560 SEC22CQ9BRL7 303 aa16.44■□□□□ 0.22
SEMA3B-209ENST00000456560 POTEKPQ9BYX7 375 aa16.44■□□□□ 0.22
SEMA3B-209ENST00000456560 KCNK15Q9H427 330 aa16.44■□□□□ 0.22
SEMA3B-209ENST00000456560 PRMT8Q9NR22 394 aaPredicted RBP16.44■□□□□ 0.22
SEMA3B-209ENST00000456560 VDAC3Q9Y277 283 aa16.44■□□□□ 0.22
SEMA3B-209ENST00000456560 LIPT2A6NK58 231 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 AQP8O94778 261 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 ZNF823P16415 610 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 HSF1Q00613 529 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 TOMM20Q15388 145 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 NR0B2Q15466 257 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 SLC25A53Q5H9E4 307 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 SLC25A25Q6KCM7 469 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 NHLRC1Q6VVB1 395 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 SPICQ8N5J4 248 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 FANCFQ9NPI8 374 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 TAS2R4Q9NYW5 299 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 RARRES3Q9UL19 164 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 ADAMTS9Q9P2N4 1935 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 TRAV18A0A075B6X5 111 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 IGHV5-10-1A0A0J9YXX1 117 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 TMEM272A0A1B0GTI8 110 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 KDM4BO94953 1096 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 PTGDSP41222 190 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 OPCMLQ14982 345 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 CPEB2Q7Z5Q1 589 aaKnown RBP16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 PLPP7Q8NBV4 271 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 OR5L2Q8NGL0 311 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 DUSP23Q9BVJ7 150 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 TAS2R8Q9NYW2 309 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 CDV3Q9UKY7 258 aaKnown RBP16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 EMC9Q9Y3B6 208 aa16.43■□□□□ 0.22
SEMA3B-209ENST00000456560 BDP1A6H8Y1 2624 aa16.42■□□□□ 0.22
SEMA3B-209ENST00000456560 IGLV3-32A0A0A0MS00 114 aa16.42■□□□□ 0.22
SEMA3B-209ENST00000456560 SHISA8B8ZZ34 492 aa16.42■□□□□ 0.22
SEMA3B-209ENST00000456560 ISG15P05161 165 aa16.42■□□□□ 0.22
SEMA3B-209ENST00000456560 CD2P06729 351 aa16.42■□□□□ 0.22
SEMA3B-209ENST00000456560 CPN1P15169 458 aa16.42■□□□□ 0.22
SEMA3B-209ENST00000456560 MSX1P28360 303 aa16.42■□□□□ 0.22
SEMA3B-209ENST00000456560 ZXDAP98168 799 aa16.42■□□□□ 0.22
SEMA3B-209ENST00000456560 POU3F1Q03052 451 aaPredicted RBP16.42■□□□□ 0.22
SEMA3B-209ENST00000456560 TLE3Q04726 772 aa16.42■□□□□ 0.22
SEMA3B-209ENST00000456560 PCGF3Q3KNV8 242 aa16.42■□□□□ 0.22
SEMA3B-209ENST00000456560 GLT8D1Q68CQ7 371 aa16.42■□□□□ 0.22
SEMA3B-209ENST00000456560 DEGS2Q6QHC5 323 aa16.42■□□□□ 0.22
SEMA3B-209ENST00000456560 DCXRQ7Z4W1 244 aa16.42■□□□□ 0.22
SEMA3B-209ENST00000456560 GPAT4Q86UL3 456 aa16.42■□□□□ 0.22
SEMA3B-209ENST00000456560 UXS1Q8NBZ7 420 aa16.42■□□□□ 0.22
SEMA3B-209ENST00000456560 MED29Q9NX70 200 aa16.42■□□□□ 0.22
SEMA3B-209ENST00000456560 KLHL13Q9P2N7 655 aa16.42■□□□□ 0.22
SEMA3B-209ENST00000456560 NCOR1O75376 2440 aa16.42■□□□□ 0.22
SEMA3B-209ENST00000456560 VPS13AQ96RL7 3174 aa16.42■□□□□ 0.22
SEMA3B-209ENST00000456560 CSF1P09603 554 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms