RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 ERVK-18Q9QC07 812 aa14.5□□□□□ -0.09
CCDC90B-202ENST00000455220 LAMP5Q9UJQ1 280 aa14.5□□□□□ -0.09
CCDC90B-202ENST00000455220 GDF2Q9UK05 429 aaPredicted RBP14.5□□□□□ -0.09
CCDC90B-202ENST00000455220 KLHDC2Q9Y2U9 406 aa14.5□□□□□ -0.09
CCDC90B-202ENST00000455220 A0A1W2PQL4 384 aaPredicted RBP14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 NKX2-6A6NCS4 301 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 C16orf97H3BN30 126 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 PHYHO14832 338 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 RGS10O43665 173 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 MRPS14O60783 128 aaKnown RBP14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 UBL3O95164 117 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 CLDN14O95500 239 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 HLA-HP01893 362 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 ZNF85Q03923 595 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 TFF3Q07654 80 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 SCRN3Q0VDG4 424 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 EIF2B1Q14232 305 aaKnown RBP14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 TIMM23BQ5SRD1 257 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 PRSS48Q7RTY5 328 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 DCXRQ7Z4W1 244 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 P2RY8Q86VZ1 359 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 RFLNBQ8N5W9 214 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 GJC3Q8NFK1 279 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 OR2AJ1Q8NGZ0 328 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 NANOS1Q8WY41 292 aaKnown RBP14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 S100PBPQ96BU1 408 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 MAP6Q96JE9 813 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 TBX5Q99593 518 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 ABHD6Q9BV23 337 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 CDCA4Q9BXL8 241 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 C1orf198Q9H425 327 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 KCNJ16Q9NPI9 418 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 EXOSC1Q9Y3B2 195 aaKnown RBP14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 USP9XQ93008 2570 aaPredicted RBP14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 DOPEY1Q5JWR5 2465 aa14.49□□□□□ -0.09
CCDC90B-202ENST00000455220 ADGRG4Q8IZF6 3080 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 WIPF3A6NGB9 483 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 ZNF670-ZNF695F2Z2N8 137 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 PYCARD-AS1I3L0S3 204 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 RER1O15258 196 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 LYNP07948 512 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 PATE4P0C8F1 98 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 LIMS3P0CW19 117 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 LIMS4P0CW20 117 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 PLA2G2AP14555 144 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 ZNF32P17041 273 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 EEF1B2P24534 225 aaKnown RBP14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 HOXC12P31275 282 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 PIGFQ07326 219 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 CFAP77Q6ZQR2 320 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 RHOUQ7L0Q8 258 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 SSX6Q7RTT6 188 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 OR10S1Q8NGN2 331 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 OR52N5Q8NH56 324 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 RNF133Q8WVZ7 376 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 ASB17Q8WXJ9 295 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 AMELYQ99218 206 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 ACTR6Q9GZN1 396 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 PNRC2Q9NPJ4 139 aaKnown RBP14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 ERVK13-1Q9NX77 482 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 AMDHD2Q9Y303 409 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 TIMM10BQ9Y5J6 103 aa14.48□□□□□ -0.09
CCDC90B-202ENST00000455220 DAPL1A0PJW8 107 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 PRR32B1ATL7 298 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 MT-ND2P03891 347 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 UBE2NP61088 152 aaKnown RBP14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 PSG4Q00888 419 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 GALEQ14376 348 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 IRF3Q14653 427 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 CCDC92Q53HC0 331 aaPredicted RBP14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 ZNF684Q5T5D7 378 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 LRRC46Q96FV0 321 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 OR2H1Q9GZK4 316 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 NOX3Q9HBY0 568 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 SLC25A15Q9Y619 301 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 GCN1Q92616 2671 aaKnown RBP14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 PRR14LQ5THK1 2151 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 WNT11O96014 354 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 MYL12AP19105 171 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 ARR3P36575 388 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 CAPZA2P47755 286 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 ETV1P50549 477 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 CDH15P55291 814 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 RAB1AP62820 205 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 TUBA1BP68363 451 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 TUBA4AP68366 448 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 SORDQ00796 357 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 ROM1Q03395 351 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 EGR3Q06889 387 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 GSG1Q2KHT4 349 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 TMEM53Q6P2H8 277 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 ZNF773Q6PK81 442 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 ZNF322Q6U7Q0 402 aaPredicted RBP14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 TUBA1AQ71U36 451 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 LHFPL3Q86UP9 236 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 THEM6Q8WUY1 208 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 SLAMF6Q96DU3 332 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 ZNF75AQ96N20 296 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 ALG8Q9BVK2 526 aa14.47□□□□□ -0.09
CCDC90B-202ENST00000455220 WNT5BQ9H1J7 359 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms