RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 BCL2L14Q9BZR8 327 aa12.19□□□□□ -0.46
HDAC4-205ENST00000454542 MRPL22Q9NWU5 206 aaKnown RBP12.19□□□□□ -0.46
HDAC4-205ENST00000454542 KCNG2Q9UJ96 466 aa12.19□□□□□ -0.46
HDAC4-205ENST00000454542 NDRG4Q9ULP0 352 aaKnown RBP12.19□□□□□ -0.46
HDAC4-205ENST00000454542 CMAHPQ9Y471 501 aa12.19□□□□□ -0.46
HDAC4-205ENST00000454542 H3BNX3 289 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 SGCEO43556 437 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 IFNGP01579 166 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 BMP4P12644 408 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 ZNF250P15622 560 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 ZNF3P17036 446 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 PRKACGP22612 351 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 GGT2P36268 569 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 GDI2P50395 445 aaKnown RBP12.18□□□□□ -0.46
HDAC4-205ENST00000454542 DAPP51397 102 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 KPNB1Q14974 876 aaKnown RBP12.18□□□□□ -0.46
HDAC4-205ENST00000454542 RAB35Q15286 201 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 MEP1BQ16820 701 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 KRTAP27-1Q3LI81 207 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 CCDC92Q53HC0 331 aaPredicted RBP12.18□□□□□ -0.46
HDAC4-205ENST00000454542 LINC01590Q5TEZ4 76 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 OTPQ5XKR4 325 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 SLC27A4Q6P1M0 643 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 RFPL4BQ6ZWI9 263 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 HIPK1Q86Z02 1210 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 SVOPLQ8N434 492 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 OR2T4Q8NH00 348 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 ZNRF4Q8WWF5 429 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 LRTOMTQ8WZ04 291 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 COX4I2Q96KJ9 171 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 SORCS2Q96PQ0 1159 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 BDH2Q9BUT1 245 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 RERGLQ9H628 205 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 ZNF556Q9HAH1 456 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 SRA1Q9HD15 236 aaKnown RBP12.18□□□□□ -0.46
HDAC4-205ENST00000454542 MED13LQ71F56 2210 aa12.18□□□□□ -0.46
HDAC4-205ENST00000454542 C5orf49A4QMS7 147 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 RIIAD1A6NNX1 92 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 H3BN98 237 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 H3BSA7 217 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 FAM157BP0CG42 384 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 PSKH1P11801 424 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 SPI1P17947 270 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 HTR5AP47898 357 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 ARHGDIAP52565 204 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 UCP2P55851 309 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 ERVS71-1P61550 626 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 CDK5Q00535 292 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 TEKQ02763 1124 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 PCK2Q16822 640 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 KDM4DQ6B0I6 523 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 RGS7BPQ6MZT1 257 aaPredicted RBP12.17□□□□□ -0.46
HDAC4-205ENST00000454542 SLC18B1Q6NT16 456 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 ACSM5Q6NUN0 579 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 ALDH16A1Q8IZ83 802 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 ATG16L2Q8NAA4 619 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 COQ7Q99807 217 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 HDHD2Q9H0R4 259 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 PNRC2Q9NPJ4 139 aaKnown RBP12.17□□□□□ -0.46
HDAC4-205ENST00000454542 PAPOLBQ9NRJ5 636 aaKnown RBP12.17□□□□□ -0.46
HDAC4-205ENST00000454542 PLEK2Q9NYT0 353 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 MYEF2Q9P2K5 600 aaKnown RBP12.17□□□□□ -0.46
HDAC4-205ENST00000454542 CYB5R1Q9UHQ9 305 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 COMMD3-BMI1R4GMX3 469 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 PMF1-BGLAPU3KQ54 211 aa12.17□□□□□ -0.46
HDAC4-205ENST00000454542 VSTM5A8MXK1 200 aa12.16□□□□□ -0.46
HDAC4-205ENST00000454542 J3QW42 95 aa12.16□□□□□ -0.46
HDAC4-205ENST00000454542 RER1O15258 196 aa12.16□□□□□ -0.46
HDAC4-205ENST00000454542 SURF4O15260 269 aa12.16□□□□□ -0.46
HDAC4-205ENST00000454542 CD99P14209 185 aa12.16□□□□□ -0.46
HDAC4-205ENST00000454542 FOSL1P15407 271 aa12.16□□□□□ -0.46
HDAC4-205ENST00000454542 PYCR1P32322 319 aa12.16□□□□□ -0.46
HDAC4-205ENST00000454542 RAD52P43351 418 aa12.16□□□□□ -0.46
HDAC4-205ENST00000454542 EFNA4P52798 201 aa12.16□□□□□ -0.46
HDAC4-205ENST00000454542 TMEM255AQ5JRV8 349 aa12.16□□□□□ -0.46
HDAC4-205ENST00000454542 ZFP1Q6P2D0 407 aa12.16□□□□□ -0.46
HDAC4-205ENST00000454542 LYPD4Q6UWN0 246 aa12.16□□□□□ -0.46
HDAC4-205ENST00000454542 CFAP77Q6ZQR2 320 aa12.16□□□□□ -0.46
HDAC4-205ENST00000454542 LRP11Q86VZ4 500 aa12.16□□□□□ -0.46
HDAC4-205ENST00000454542 C1orf174Q8IYL3 243 aa12.16□□□□□ -0.46
HDAC4-205ENST00000454542 PROKR2Q8NFJ6 384 aa12.16□□□□□ -0.46
HDAC4-205ENST00000454542 GJC3Q8NFK1 279 aa12.16□□□□□ -0.46
HDAC4-205ENST00000454542 OR9Q1Q8NGQ5 310 aa12.16□□□□□ -0.46
HDAC4-205ENST00000454542 PYDC1Q8WXC3 89 aa12.16□□□□□ -0.46
HDAC4-205ENST00000454542 CENPNQ96H22 339 aaPredicted RBP12.16□□□□□ -0.46
HDAC4-205ENST00000454542 HCAR1Q9BXC0 346 aa12.16□□□□□ -0.46
HDAC4-205ENST00000454542 MARCH7Q9H992 704 aa12.16□□□□□ -0.46
HDAC4-205ENST00000454542 KIF17Q9P2E2 1029 aa12.16□□□□□ -0.46
HDAC4-205ENST00000454542 TMEFF2Q9UIK5 374 aaPredicted RBP12.16□□□□□ -0.46
HDAC4-205ENST00000454542 POLR1DQ9Y2S0 133 aa12.16□□□□□ -0.46
HDAC4-205ENST00000454542 CHD3Q12873 2000 aaKnown RBP12.16□□□□□ -0.46
HDAC4-205ENST00000454542 MAP1AP78559 2803 aaPredicted RBP12.15□□□□□ -0.46
HDAC4-205ENST00000454542 A0A096LNT2 108 aa12.15□□□□□ -0.46
HDAC4-205ENST00000454542 TRIM64A6NGJ6 449 aa12.15□□□□□ -0.46
HDAC4-205ENST00000454542 TRIM64BA6NI03 449 aa12.15□□□□□ -0.46
HDAC4-205ENST00000454542 FAM171A2A8MVW0 826 aa12.15□□□□□ -0.46
HDAC4-205ENST00000454542 G3V2T6 193 aa12.15□□□□□ -0.46
HDAC4-205ENST00000454542 CLUP10909 449 aa12.15□□□□□ -0.46
HDAC4-205ENST00000454542 ZNF23P17027 643 aa12.15□□□□□ -0.46
HDAC4-205ENST00000454542 NUDT6P53370 316 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms