RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 VASH1Q7L8A9 365 aaPredicted RBP12.45□□□□□ -0.42
HSPG2-207ENST00000453796 LINC00471Q8N535 108 aa12.45□□□□□ -0.42
HSPG2-207ENST00000453796 ZNF540Q8NDQ6 660 aa12.45□□□□□ -0.42
HSPG2-207ENST00000453796 YAE1D1Q9NRH1 226 aa12.45□□□□□ -0.42
HSPG2-207ENST00000453796 SLCO1C1Q9NYB5 712 aa12.45□□□□□ -0.42
HSPG2-207ENST00000453796 C17orf100A8MU93 164 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 A8MV72 311 aaPredicted RBP12.44□□□□□ -0.42
HSPG2-207ENST00000453796 SGCEO43556 437 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 IDH3BO43837 385 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 DOK2O60496 412 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 LILRA1O75019 489 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 UBOX5O94941 541 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 GPANK1O95872 356 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 COL8A2P25067 703 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 CRABP1P29762 137 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 MPV17P39210 176 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 MMP15P51511 669 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 SELENOVP59797 346 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 DBPQ10586 325 aaPredicted RBP12.44□□□□□ -0.42
HSPG2-207ENST00000453796 PPP1R8Q12972 351 aaKnown RBP12.44□□□□□ -0.42
HSPG2-207ENST00000453796 NKPD1Q17RQ9 610 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 CCDC92Q53HC0 331 aaPredicted RBP12.44□□□□□ -0.42
HSPG2-207ENST00000453796 MBNL2Q5VZF2 373 aaKnown RBP12.44□□□□□ -0.42
HSPG2-207ENST00000453796 LEG1Q6P5S2 330 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 C1orf174Q8IYL3 243 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 OR6V1Q8N148 313 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 ICA1LQ8NDH6 482 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 SLC25A40Q8TBP6 338 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 IPCEF1Q8WWN9 437 aaPredicted RBP12.44□□□□□ -0.42
HSPG2-207ENST00000453796 GTF3AQ92664 365 aaKnown RBP12.44□□□□□ -0.42
HSPG2-207ENST00000453796 POP5Q969H6 163 aaKnown RBP12.44□□□□□ -0.42
HSPG2-207ENST00000453796 YIPF5Q969M3 257 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 C4orf45Q96LM5 186 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 NMNAT3Q96T66 252 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 IFT27Q9BW83 186 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 OR2J1Q9GZK6 312 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 RACGAP1Q9H0H5 632 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 RERGLQ9H628 205 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 EGLN3Q9H6Z9 239 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 HINT3Q9NQE9 182 aaKnown RBP12.44□□□□□ -0.42
HSPG2-207ENST00000453796 NKIRAS2Q9NYR9 191 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 IL20Q9NYY1 176 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 EIF3KQ9UBQ5 218 aaKnown RBP12.44□□□□□ -0.42
HSPG2-207ENST00000453796 NDRG4Q9ULP0 352 aaKnown RBP12.44□□□□□ -0.42
HSPG2-207ENST00000453796 B9D1Q9UPM9 204 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 SVEP1Q4LDE5 3571 aa12.44□□□□□ -0.42
HSPG2-207ENST00000453796 JMJD1CQ15652 2540 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 OR6C6A6NF89 314 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 H3BSA7 217 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 BHLHE40O14503 412 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 RP2O75695 350 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 GASTP01350 101 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 ZNF16P17020 682 aaPredicted RBP12.43□□□□□ -0.42
HSPG2-207ENST00000453796 MAGEB1P43366 347 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 HTR5AP47898 357 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 GZMKP49863 264 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 PPP1CBP62140 327 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 HIST1H3AP68431 136 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 MRPS11P82912 194 aaKnown RBP12.43□□□□□ -0.42
HSPG2-207ENST00000453796 TRAP1Q12931 704 aaKnown RBP12.43□□□□□ -0.42
HSPG2-207ENST00000453796 ZNF718Q3SXZ3 478 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 FAM98BQ52LJ0 330 aaKnown RBP12.43□□□□□ -0.42
HSPG2-207ENST00000453796 SPATA46Q5T0L3 261 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 HIST2H3PS2Q5TEC6 136 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 CYB5R2Q6BCY4 276 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 OR2T5Q6IEZ7 315 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 PGM2L1Q6PCE3 622 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 DNM1P34Q6PK57 102 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 HIST2H3AQ71DI3 136 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 ZBTB46Q86UZ6 589 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 JAZF1Q86VZ6 243 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 HIPK1Q86Z02 1210 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 ADGRG5Q8IZF4 528 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 NPEPL1Q8NDH3 523 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 OR8D4Q8NGM9 314 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 OR2T29Q8NH02 315 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 OR4K13Q8NH42 304 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 ABHD4Q8TB40 342 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 KLF14Q8TD94 323 aaPredicted RBP12.43□□□□□ -0.42
HSPG2-207ENST00000453796 RDH5Q92781 318 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 CCDC124Q96CT7 223 aaKnown RBP12.43□□□□□ -0.42
HSPG2-207ENST00000453796 SLC7A6OSQ96CW6 309 aaPredicted RBP12.43□□□□□ -0.42
HSPG2-207ENST00000453796 DDOQ99489 341 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 SOX7Q9BT81 388 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 THTPAQ9BU02 230 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 PLA2G12AQ9BZM1 189 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 ELOVL3Q9HB03 270 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 TMEM160Q9NX00 188 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 PLEK2Q9NYT0 353 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 ASH2LQ9UBL3 628 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 ATPIF1Q9UII2 106 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 GPR160Q9UJ42 338 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 LHFPL6Q9Y693 200 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 CDH10Q9Y6N8 788 aa12.43□□□□□ -0.42
HSPG2-207ENST00000453796 LRP5LA4QPB2 252 aa12.42□□□□□ -0.42
HSPG2-207ENST00000453796 OR6C68A6NDL8 312 aa12.42□□□□□ -0.42
HSPG2-207ENST00000453796 CCNB2O95067 398 aa12.42□□□□□ -0.42
HSPG2-207ENST00000453796 RENP00797 406 aa12.42□□□□□ -0.42
HSPG2-207ENST00000453796 RAP2AP10114 183 aa12.42□□□□□ -0.42
HSPG2-207ENST00000453796 ACHEP22303 614 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms