RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-219	ENST00000453310	RER1	O15258	196 aa		13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	SLC16A6	O15403	523 aa		13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	SGCE	O43556	437 aa		13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	DOK2	O60496	412 aa		13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	SPARC	P09486	303 aa		13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	PSKH1	P11801	424 aa		13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	APEX1	P27695	318 aa	Known RBP	13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	RPS27	P42677	84 aa	Known RBP	13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	ENTPD1	P49961	510 aa		13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	KEAP1	Q14145	624 aa		13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	LCN1P1	Q5VSP4	162 aa		13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	AADACL4	Q5VUY2	407 aa		13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	NXNL2	Q5VZ03	156 aa		13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	SLC18B1	Q6NT16	456 aa		13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	ZNF774	Q6NX45	483 aa		13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	B3GLCT	Q6Y288	498 aa		13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	ERI1	Q8IV48	349 aa	Known RBP	13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	LINC00346	Q8IVM7	164 aa		13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	GID4	Q8IVV7	300 aa		13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	ALDH16A1	Q8IZ83	802 aa		13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	DEPDC4	Q8N2C3	294 aa		13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	ZNF555	Q8NEP9	628 aa		13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	SLC30A7	Q8NEW0	376 aa		13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	GJC3	Q8NFK1	279 aa		13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	TRUB1	Q8WWH5	349 aa	Known RBP	13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	INTS14	Q96SY0	518 aa		13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	PLEK2	Q9NYT0	353 aa		13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	GDF2	Q9UK05	429 aa	Predicted RBP	13.59	□□□□□ -0.23
RBM39-219	ENST00000453310	ZNF593	O00488	134 aa	Predicted RBP	13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	STOM	P27105	288 aa		13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	APLNR	P35414	380 aa		13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	CDH11	P55287	796 aa		13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	KRTAP10-9	P60411	292 aa		13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	HIST1H3A	P68431	136 aa		13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	PCK2	Q16822	640 aa		13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	TBC1D28	Q2M2D7	210 aa		13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	ZNF672	Q499Z4	452 aa	Predicted RBP	13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	CCDC92	Q53HC0	331 aa	Predicted RBP	13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	TEX30	Q5JUR7	227 aa		13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	HIST2H3PS2	Q5TEC6	136 aa		13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	CFAP77	Q6ZQR2	320 aa		13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	HIST2H3A	Q71DI3	136 aa		13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	MEPCE	Q7L2J0	689 aa	Known RBP	13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	VASH1	Q7L8A9	365 aa	Predicted RBP	13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	TIGD4	Q8IY51	512 aa		13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	OR6N2	Q8NGY6	317 aa		13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	OR2AJ1	Q8NGZ0	328 aa		13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	CYGB	Q8WWM9	190 aa		13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	AKAP1	Q92667	903 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	NEUROG1	Q92886	237 aa		13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	UBE2F	Q969M7	185 aa		13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	TEAD3	Q99594	435 aa		13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	PLEKHF2	Q9H8W4	249 aa		13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	MARCH7	Q9H992	704 aa		13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	DNAJC27	Q9NZQ0	273 aa		13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	H2AFY2	Q9P0M6	372 aa	Predicted RBP	13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	POU2F3	Q9UKI9	436 aa		13.58	□□□□□ -0.24
RBM39-219	ENST00000453310	ROS1	P08922	2347 aa		13.57	□□□□□ -0.24
RBM39-219	ENST00000453310	SLC22A31	A6NKX4	558 aa		13.57	□□□□□ -0.24
RBM39-219	ENST00000453310	SYNGR3	O43761	229 aa		13.57	□□□□□ -0.24
RBM39-219	ENST00000453310	SELENOF	O60613	162 aa		13.57	□□□□□ -0.24
RBM39-219	ENST00000453310	TMCC2	O75069	709 aa		13.57	□□□□□ -0.24
RBM39-219	ENST00000453310	COX5B	P10606	129 aa		13.57	□□□□□ -0.24
RBM39-219	ENST00000453310	CCL2	P13500	99 aa		13.57	□□□□□ -0.24
RBM39-219	ENST00000453310	ZNF35	P13682	527 aa		13.57	□□□□□ -0.24
RBM39-219	ENST00000453310	HTR5A	P47898	357 aa		13.57	□□□□□ -0.24
RBM39-219	ENST00000453310	SNRPG	P62308	76 aa	Known RBP	13.57	□□□□□ -0.24
RBM39-219	ENST00000453310	RAB35	Q15286	201 aa		13.57	□□□□□ -0.24
RBM39-219	ENST00000453310	PAQR4	Q8N4S7	273 aa	Predicted RBP	13.57	□□□□□ -0.24
RBM39-219	ENST00000453310	DHRSX	Q8N5I4	330 aa		13.57	□□□□□ -0.24
RBM39-219	ENST00000453310	OR1J2	Q8NGS2	313 aa		13.57	□□□□□ -0.24
RBM39-219	ENST00000453310	LILRB1	Q8NHL6	650 aa	Predicted RBP	13.57	□□□□□ -0.24
RBM39-219	ENST00000453310	ZNF582	Q96NG8	517 aa	Predicted RBP	13.57	□□□□□ -0.24
RBM39-219	ENST00000453310	ADI1	Q9BV57	179 aa		13.57	□□□□□ -0.24
RBM39-219	ENST00000453310	VCX3B	Q9H321	246 aa		13.57	□□□□□ -0.24
RBM39-219	ENST00000453310	UBTD1	Q9HAC8	227 aa		13.57	□□□□□ -0.24
RBM39-219	ENST00000453310	CDH20	Q9HBT6	801 aa		13.57	□□□□□ -0.24
RBM39-219	ENST00000453310	ATP23	Q9Y6H3	246 aa		13.57	□□□□□ -0.24
RBM39-219	ENST00000453310	CACNA1D	Q01668	2161 aa		13.56	□□□□□ -0.24
RBM39-219	ENST00000453310	RAI1	Q7Z5J4	1906 aa	Predicted RBP	13.56	□□□□□ -0.24
RBM39-219	ENST00000453310	LOC100509620	A0A075B734	347 aa		13.56	□□□□□ -0.24
RBM39-219	ENST00000453310	OR6C6	A6NF89	314 aa		13.56	□□□□□ -0.24
RBM39-219	ENST00000453310	HS3ST1	O14792	307 aa		13.56	□□□□□ -0.24
RBM39-219	ENST00000453310	CCNO	P22674	350 aa		13.56	□□□□□ -0.24
RBM39-219	ENST00000453310	NAA10	P41227	235 aa	Predicted RBP	13.56	□□□□□ -0.24
RBM39-219	ENST00000453310	GDI2	P50395	445 aa	Known RBP	13.56	□□□□□ -0.24
RBM39-219	ENST00000453310	ADARB1	P78563	741 aa	Known RBP	13.56	□□□□□ -0.24
RBM39-219	ENST00000453310	GGTLC2	Q14390	218 aa		13.56	□□□□□ -0.24
RBM39-219	ENST00000453310	ELFN2	Q5R3F8	820 aa		13.56	□□□□□ -0.24
RBM39-219	ENST00000453310	TTC23	Q5W5X9	447 aa		13.56	□□□□□ -0.24
RBM39-219	ENST00000453310	TMEM154	Q6P9G4	183 aa		13.56	□□□□□ -0.24
RBM39-219	ENST00000453310	DPY19L4	Q7Z388	723 aa		13.56	□□□□□ -0.24
RBM39-219	ENST00000453310	DCXR	Q7Z4W1	244 aa		13.56	□□□□□ -0.24
RBM39-219	ENST00000453310	ENTHD1	Q8IYW4	607 aa		13.56	□□□□□ -0.24
RBM39-219	ENST00000453310	OR4F15	Q8NGB8	312 aa		13.56	□□□□□ -0.24
RBM39-219	ENST00000453310	OR1F12	Q8NHA8	337 aa		13.56	□□□□□ -0.24
RBM39-219	ENST00000453310	MAP6	Q96JE9	813 aa		13.56	□□□□□ -0.24
RBM39-219	ENST00000453310	POM121L2	Q96KW2	1035 aa		13.56	□□□□□ -0.24
RBM39-219	ENST00000453310	APOL4	Q9BPW4	351 aa		13.56	□□□□□ -0.24
RBM39-219	ENST00000453310	HDHD2	Q9H0R4	259 aa		13.56	□□□□□ -0.24

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