RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 CDH20Q9HBT6 801 aa13.8□□□□□ -0.2
SCAMP4-205ENST00000452128 SRA1Q9HD15 236 aaKnown RBP13.8□□□□□ -0.2
SCAMP4-205ENST00000452128 KLHL21Q9UJP4 597 aa13.8□□□□□ -0.2
SCAMP4-205ENST00000452128 FZR1Q9UM11 496 aa13.8□□□□□ -0.2
SCAMP4-205ENST00000452128 FKBP7Q9Y680 259 aa13.8□□□□□ -0.2
SCAMP4-205ENST00000452128 LHFPL6Q9Y693 200 aa13.8□□□□□ -0.2
SCAMP4-205ENST00000452128 CR1P17927 2039 aa13.8□□□□□ -0.2
SCAMP4-205ENST00000452128 C5orf49A4QMS7 147 aa13.79□□□□□ -0.2
SCAMP4-205ENST00000452128 CST1P01037 141 aa13.79□□□□□ -0.2
SCAMP4-205ENST00000452128 IGHV3-13P01766 116 aa13.79□□□□□ -0.2
SCAMP4-205ENST00000452128 GIFP27352 417 aa13.79□□□□□ -0.2
SCAMP4-205ENST00000452128 CRABP1P29762 137 aa13.79□□□□□ -0.2
SCAMP4-205ENST00000452128 GGT2P36268 569 aa13.79□□□□□ -0.2
SCAMP4-205ENST00000452128 GUCA1AP43080 201 aaPredicted RBP13.79□□□□□ -0.2
SCAMP4-205ENST00000452128 COX10Q12887 443 aa13.79□□□□□ -0.2
SCAMP4-205ENST00000452128 FLOT2Q14254 428 aa13.79□□□□□ -0.2
SCAMP4-205ENST00000452128 CLEC12AQ5QGZ9 265 aa13.79□□□□□ -0.2
SCAMP4-205ENST00000452128 SLC35F1Q5T1Q4 408 aa13.79□□□□□ -0.2
SCAMP4-205ENST00000452128 RGS7BPQ6MZT1 257 aaPredicted RBP13.79□□□□□ -0.2
SCAMP4-205ENST00000452128 LEG1Q6P5S2 330 aa13.79□□□□□ -0.2
SCAMP4-205ENST00000452128 CLEC2AQ6UVW9 174 aa13.79□□□□□ -0.2
SCAMP4-205ENST00000452128 NEU4Q8WWR8 484 aaPredicted RBP13.79□□□□□ -0.2
SCAMP4-205ENST00000452128 FAM168AQ92567 244 aa13.79□□□□□ -0.2
SCAMP4-205ENST00000452128 UTP4Q969X6 686 aaKnown RBP13.79□□□□□ -0.2
SCAMP4-205ENST00000452128 VRK1Q99986 396 aaPredicted RBP13.79□□□□□ -0.2
SCAMP4-205ENST00000452128 RBM4Q9BWF3 364 aaKnown RBP13.79□□□□□ -0.2
SCAMP4-205ENST00000452128 RAB1BQ9H0U4 201 aa13.79□□□□□ -0.2
SCAMP4-205ENST00000452128 LRMDAQ9H2I8 198 aa13.79□□□□□ -0.2
SCAMP4-205ENST00000452128 MRPL22Q9NWU5 206 aaKnown RBP13.79□□□□□ -0.2
SCAMP4-205ENST00000452128 RER1O15258 196 aa13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 FKBP6O75344 327 aa13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 ATP5HO75947 161 aa13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 CSF3P09919 207 aa13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 GSTM3P21266 225 aa13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 ALDH3B1P43353 468 aa13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 GDI2P50395 445 aaKnown RBP13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 SCRN3Q0VDG4 424 aa13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 AQP6Q13520 282 aa13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 RIN1Q13671 783 aa13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 MAD2L1BPQ15013 274 aaPredicted RBP13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 MEP1BQ16820 701 aa13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 ELFN2Q5R3F8 820 aa13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 MBNL2Q5VZF2 373 aaKnown RBP13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 RFPL4BQ6ZWI9 263 aa13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 Q71RC1 249 aaPredicted RBP13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 ALDH16A1Q8IZ83 802 aa13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 ZNF786Q8N393 782 aa13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 OR10G2Q8NGC3 310 aa13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 OR52E2Q8NGJ4 325 aa13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 GIPC3Q8TF64 312 aa13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 C4orf45Q96LM5 186 aa13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 ASH2LQ9UBL3 628 aa13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 ATPIF1Q9UII2 106 aa13.78□□□□□ -0.2
SCAMP4-205ENST00000452128 LOC390937A0A1W2PQ73 354 aa13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 M0R233 179 aa13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 NDUFS8O00217 210 aa13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 SGCEO43556 437 aa13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 STAMBPO95630 424 aa13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 SLC25A16P16260 332 aa13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 MPV17P39210 176 aa13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 NR4A2P43354 598 aa13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 JMJD1CQ15652 2540 aa13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 ASRGL1Q7L266 308 aa13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 C1orf174Q8IYL3 243 aa13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 HS3ST5Q8IZT8 346 aa13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 SLC37A3Q8NCC5 494 aa13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 SDR9C7Q8NEX9 313 aa13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 SYNPRQ8TBG9 265 aa13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 DUS3LQ96G46 650 aaKnown RBP13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 POM121Q96HA1 1249 aa13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 TSSK6Q9BXA6 273 aa13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 MS4A5Q9H3V2 200 aa13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 MYOZ1Q9NP98 299 aaPredicted RBP13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 PNRC2Q9NPJ4 139 aaKnown RBP13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 RPRD1BQ9NQG5 326 aaKnown RBP13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 TBCCD1Q9NVR7 557 aa13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 DNAJB9Q9UBS3 223 aa13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 CYB5R1Q9UHQ9 305 aa13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 DUSP13Q9UII6 198 aa13.77□□□□□ -0.21
SCAMP4-205ENST00000452128 CHD3Q12873 2000 aaKnown RBP13.76□□□□□ -0.21
SCAMP4-205ENST00000452128 YLPM1P49750 1951 aaKnown RBP13.76□□□□□ -0.21
SCAMP4-205ENST00000452128 RENP00797 406 aa13.76□□□□□ -0.21
SCAMP4-205ENST00000452128 HPXP02790 462 aa13.76□□□□□ -0.21
SCAMP4-205ENST00000452128 PSKH1P11801 424 aa13.76□□□□□ -0.21
SCAMP4-205ENST00000452128 DAOP14920 347 aa13.76□□□□□ -0.21
SCAMP4-205ENST00000452128 PDLIM4P50479 330 aa13.76□□□□□ -0.21
SCAMP4-205ENST00000452128 MMP15P51511 669 aa13.76□□□□□ -0.21
SCAMP4-205ENST00000452128 SLC25A1P53007 311 aa13.76□□□□□ -0.21
SCAMP4-205ENST00000452128 KLF3P57682 345 aaPredicted RBP13.76□□□□□ -0.21
SCAMP4-205ENST00000452128 TEKQ02763 1124 aa13.76□□□□□ -0.21
SCAMP4-205ENST00000452128 PCK2Q16822 640 aa13.76□□□□□ -0.21
SCAMP4-205ENST00000452128 SLC18B1Q6NT16 456 aa13.76□□□□□ -0.21
SCAMP4-205ENST00000452128 DNM1P34Q6PK57 102 aa13.76□□□□□ -0.21
SCAMP4-205ENST00000452128 COLCA1Q6ZS62 124 aa13.76□□□□□ -0.21
SCAMP4-205ENST00000452128 JAZF1Q86VZ6 243 aa13.76□□□□□ -0.21
SCAMP4-205ENST00000452128 SPATA24Q86W54 205 aa13.76□□□□□ -0.21
SCAMP4-205ENST00000452128 CYB561A3Q8NBI2 242 aa13.76□□□□□ -0.21
SCAMP4-205ENST00000452128 OR1J1Q8NGS3 322 aa13.76□□□□□ -0.21
SCAMP4-205ENST00000452128 OR1F12Q8NHA8 337 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms