RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ZNF133P52736 654 aaPredicted RBP9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 TNP2Q05952 138 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 FOXO1Q12778 655 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 CDC20Q12834 499 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 ZNF79Q15937 498 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 PYDC2Q56P42 97 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 WDR38Q5JTN6 314 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 AGAP7PQ5VUJ5 663 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 SPINK14Q6IE38 97 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 OR7E24Q6IFN5 339 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 CNIH2Q6PI25 160 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 NR2C2APQ86WQ0 139 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 LILRB2Q8N423 598 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 OR2V1Q8NHB1 315 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 ST7LQ8TDW4 575 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 RNF133Q8WVZ7 376 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 HSD17B8Q92506 261 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 ABTB1Q969K4 478 aaPredicted RBP9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 MCHR2Q969V1 340 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 CPNE4Q96A23 557 aaPredicted RBP9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 AGAP4Q96P64 663 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 SEC61A2Q9H9S3 476 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 CYB5R1Q9UHQ9 305 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 ING1Q9UK53 422 aaPredicted RBP9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 RCE1Q9Y256 329 aa9.39□□□□□ -0.91
VIPAS39-203ENST00000448935 IGKV1D-43A0A0B4J1Z2 117 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 OR5H15A6NDH6 313 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 ACOD1A6NK06 481 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 SP1P08047 785 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 RFPL3SP0C7P2 107 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 PSKH1P11801 424 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 THBS2P35442 1172 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 KIR3DL2P43630 455 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 SUCLG1P53597 346 aaKnown RBP9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 LSM6P62312 80 aaKnown RBP9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 IL18Q14116 193 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 WIPI1Q5MNZ9 446 aaPredicted RBP9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 C10orf128Q5T292 105 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 TMEM244Q5VVB8 128 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 CARD17Q5XLA6 110 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 SLC25A25Q6KCM7 469 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 BAIAP2L2Q6UXY1 529 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 ZNF704Q6ZNC4 412 aaPredicted RBP9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 LINC00696Q6ZRV3 163 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 GGNQ86UU5 652 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 CATSPERDQ86XM0 798 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 SNX29P2Q8IUI4 249 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 PRSS35Q8N3Z0 413 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 TRMT10AQ8TBZ6 339 aaKnown RBP9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 TSEN15Q8WW01 171 aaKnown RBP9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 RGP1Q92546 391 aaPredicted RBP9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 TMEM54Q969K7 222 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 SLAMF6Q96DU3 332 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 SIGLEC12Q96PQ1 595 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 OR2M2Q96R28 347 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 SDHCQ99643 169 aaPredicted RBP9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 SOSTQ9BQB4 213 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 ZNF703Q9H7S9 590 aaPredicted RBP9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 MOB1AQ9H8S9 216 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 ASCL3Q9NQ33 180 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 CYSLTR2Q9NS75 346 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 PAQR5Q9NXK6 330 aaPredicted RBP9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 GTF2A1LQ9UNN4 478 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 V9GY05 133 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 KNTC1P50748 2209 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 TRBV5-7A0A0A0MS05 114 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 A0A1W2PPK0 400 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 FAM221AA4D161 298 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 ZNF878C9JN71 531 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 AIPO00170 330 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 SMAD9O15198 467 aaKnown RBP9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 PIN1P1O15428 100 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 RAMP1O60894 148 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 ISG15P05161 165 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 UBCP0CG48 685 aaKnown RBP9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 IL7P13232 177 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 NPR2P20594 1047 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 ACHEP22303 614 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 ZNF84P51523 738 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 GFRA1P56159 465 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 SCAND1P57086 179 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 OR10A3P58181 314 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 PLGLB1Q02325 96 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 MFAP5Q13361 173 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 TMPRSS7Q7RTY8 843 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 LINC00346Q8IVM7 164 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 WDFY1Q8IWB7 410 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 SULF2Q8IWU5 870 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 SAMD12Q8N8I0 201 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 ZNF671Q8TAW3 534 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 TMEM106AQ96A25 262 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 B3GAT2Q9NPZ5 323 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 POLE4Q9NR33 117 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 CENPMQ9NSP4 180 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 FAM86C1Q9NVL1 165 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 EXTL2Q9UBQ6 330 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 HHLA2Q9UM44 414 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 SPATA2Q9UM82 520 aa9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 AK6Q9Y3D8 172 aaKnown RBP9.38□□□□□ -0.91
VIPAS39-203ENST00000448935 CACNA1HO95180 2353 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms