RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 AHCYL1O43865 530 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 FSHBP01225 129 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 IGHV2-70P01814 119 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 KDELR2P33947 212 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 GZMMP51124 257 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 BTG1P62324 171 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 IL13RA1P78552 427 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 SCRN3Q0VDG4 424 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 BTNL3Q6UXE8 466 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 RFPL4BQ6ZWI9 263 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 RRM2BQ7LG56 351 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 RNF113BQ8IZP6 322 aaKnown RBP11.22□□□□□ -0.61
HMGB3-204ENST00000448905 MUC20Q8N307 709 aaPredicted RBP11.22□□□□□ -0.61
HMGB3-204ENST00000448905 ZNF283Q8N7M2 679 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 ATG16L2Q8NAA4 619 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 OR5L1Q8NGL2 311 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 OR51A7Q8NH64 312 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 LRRC58Q96CX6 371 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 HAVCR1Q96D42 359 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 CMBLQ96DG6 245 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 THOC1Q96FV9 657 aaKnown RBP11.22□□□□□ -0.61
HMGB3-204ENST00000448905 TPD52L3Q96J77 140 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 FNDC11Q9BVV2 318 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 NPHS2Q9NP85 383 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 MMP26Q9NRE1 261 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 GID8Q9NWU2 228 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 IL20RAQ9UHF4 553 aa11.22□□□□□ -0.61
HMGB3-204ENST00000448905 A0A0G2JND7 137 aa11.21□□□□□ -0.61
HMGB3-204ENST00000448905 SHOX2O60902 331 aaPredicted RBP11.21□□□□□ -0.61
HMGB3-204ENST00000448905 ZNF12P17014 697 aa11.21□□□□□ -0.61
HMGB3-204ENST00000448905 TNFRSF1BP20333 461 aa11.21□□□□□ -0.61
HMGB3-204ENST00000448905 KITLGP21583 273 aa11.21□□□□□ -0.61
HMGB3-204ENST00000448905 RPL4P36578 427 aaKnown RBP11.21□□□□□ -0.61
HMGB3-204ENST00000448905 MDH2P40926 338 aaKnown RBP11.21□□□□□ -0.61
HMGB3-204ENST00000448905 CRYBA2P53672 197 aa11.21□□□□□ -0.61
HMGB3-204ENST00000448905 SELENOWP63302 87 aa11.21□□□□□ -0.61
HMGB3-204ENST00000448905 CYBRD1Q53TN4 286 aa11.21□□□□□ -0.61
HMGB3-204ENST00000448905 RABL3Q5HYI8 236 aa11.21□□□□□ -0.61
HMGB3-204ENST00000448905 LRRN1Q6UXK5 716 aa11.21□□□□□ -0.61
HMGB3-204ENST00000448905 CALHM3Q86XJ0 350 aa11.21□□□□□ -0.61
HMGB3-204ENST00000448905 PCYOX1LQ8NBM8 494 aa11.21□□□□□ -0.61
HMGB3-204ENST00000448905 DEFB108BQ8NET1 73 aa11.21□□□□□ -0.61
HMGB3-204ENST00000448905 OR52E2Q8NGJ4 325 aa11.21□□□□□ -0.61
HMGB3-204ENST00000448905 C10orf82Q8WW14 230 aa11.21□□□□□ -0.61
HMGB3-204ENST00000448905 PLEKHA8Q96JA3 519 aa11.21□□□□□ -0.61
HMGB3-204ENST00000448905 ZNF69Q9UC07 566 aa11.21□□□□□ -0.61
HMGB3-204ENST00000448905 INSIG2Q9Y5U4 225 aa11.21□□□□□ -0.61
HMGB3-204ENST00000448905 EFCAB9A8MZ26 197 aa11.2□□□□□ -0.62
HMGB3-204ENST00000448905 TRAPPC2LH3BP13 241 aa11.2□□□□□ -0.62
HMGB3-204ENST00000448905 SGCEO43556 437 aa11.2□□□□□ -0.62
HMGB3-204ENST00000448905 PPIAL4GP0DN37 164 aa11.2□□□□□ -0.62
HMGB3-204ENST00000448905 HTR5AP47898 357 aa11.2□□□□□ -0.62
HMGB3-204ENST00000448905 SLC9A3P48764 834 aa11.2□□□□□ -0.62
HMGB3-204ENST00000448905 GUCY1A3Q02108 690 aa11.2□□□□□ -0.62
HMGB3-204ENST00000448905 TRAM2Q15035 370 aa11.2□□□□□ -0.62
HMGB3-204ENST00000448905 MAPRE2Q15555 327 aa11.2□□□□□ -0.62
HMGB3-204ENST00000448905 LRRC23Q53EV4 343 aaPredicted RBP11.2□□□□□ -0.62
HMGB3-204ENST00000448905 COQ5Q5HYK3 327 aa11.2□□□□□ -0.62
HMGB3-204ENST00000448905 FOXL2NBQ6ZUU3 175 aa11.2□□□□□ -0.62
HMGB3-204ENST00000448905 PRRC1Q96M27 445 aa11.2□□□□□ -0.62
HMGB3-204ENST00000448905 ZNF583Q96ND8 569 aa11.2□□□□□ -0.62
HMGB3-204ENST00000448905 POLE4Q9NR33 117 aa11.2□□□□□ -0.62
HMGB3-204ENST00000448905 MIOXQ9UGB7 285 aa11.2□□□□□ -0.62
HMGB3-204ENST00000448905 AP3M1Q9Y2T2 418 aa11.2□□□□□ -0.62
HMGB3-204ENST00000448905 STARD10Q9Y365 291 aa11.2□□□□□ -0.62
HMGB3-204ENST00000448905 TENM1Q9UKZ4 2725 aa11.2□□□□□ -0.62
HMGB3-204ENST00000448905 DNAJC9-AS1A6NH13 148 aa11.19□□□□□ -0.62
HMGB3-204ENST00000448905 LRRC30A6NM36 301 aa11.19□□□□□ -0.62
HMGB3-204ENST00000448905 BBIP1A8MTZ0 92 aa11.19□□□□□ -0.62
HMGB3-204ENST00000448905 HMGB1P1B2RPK0 211 aaPredicted RBP11.19□□□□□ -0.62
HMGB3-204ENST00000448905 CLDN34H7C241 214 aa11.19□□□□□ -0.62
HMGB3-204ENST00000448905 J3QW42 95 aa11.19□□□□□ -0.62
HMGB3-204ENST00000448905 FBP2O00757 339 aa11.19□□□□□ -0.62
HMGB3-204ENST00000448905 DOK2O60496 412 aa11.19□□□□□ -0.62
HMGB3-204ENST00000448905 RNASE1P07998 156 aaKnown RBP11.19□□□□□ -0.62
HMGB3-204ENST00000448905 WNT2P09544 360 aa11.19□□□□□ -0.62
HMGB3-204ENST00000448905 RAC2P15153 192 aa11.19□□□□□ -0.62
HMGB3-204ENST00000448905 SRP9P49458 86 aaKnown RBP11.19□□□□□ -0.62
HMGB3-204ENST00000448905 RGS6P49758 472 aa11.19□□□□□ -0.62
HMGB3-204ENST00000448905 PRKCDQ05655 676 aa11.19□□□□□ -0.62
HMGB3-204ENST00000448905 ENDOGQ14249 297 aaKnown RBP11.19□□□□□ -0.62
HMGB3-204ENST00000448905 ZMYND11Q15326 602 aa11.19□□□□□ -0.62
HMGB3-204ENST00000448905 C1orf94Q6P1W5 598 aa11.19□□□□□ -0.62
HMGB3-204ENST00000448905 IGFN1Q86VF2 1251 aa11.19□□□□□ -0.62
HMGB3-204ENST00000448905 CLDN22Q8N7P3 220 aa11.19□□□□□ -0.62
HMGB3-204ENST00000448905 OR2T12Q8NG77 320 aa11.19□□□□□ -0.62
HMGB3-204ENST00000448905 OR13G1Q8NGZ3 307 aa11.19□□□□□ -0.62
HMGB3-204ENST00000448905 ZNF582Q96NG8 517 aaPredicted RBP11.19□□□□□ -0.62
HMGB3-204ENST00000448905 DUX5Q96PT3 197 aa11.19□□□□□ -0.62
HMGB3-204ENST00000448905 UNKLQ9H9P5 680 aaKnown RBP11.19□□□□□ -0.62
HMGB3-204ENST00000448905 LRCH1Q9Y2L9 728 aa11.19□□□□□ -0.62
HMGB3-204ENST00000448905 ELOVL7A1L3X0 281 aa11.18□□□□□ -0.62
HMGB3-204ENST00000448905 A8MXK9 166 aa11.18□□□□□ -0.62
HMGB3-204ENST00000448905 TMEM178BH3BS89 294 aa11.18□□□□□ -0.62
HMGB3-204ENST00000448905 MRASO14807 208 aa11.18□□□□□ -0.62
HMGB3-204ENST00000448905 EDF1O60869 148 aaKnown RBP11.18□□□□□ -0.62
HMGB3-204ENST00000448905 IFNW1P05000 195 aa11.18□□□□□ -0.62
HMGB3-204ENST00000448905 GNB2P62879 340 aa11.18□□□□□ -0.62
HMGB3-204ENST00000448905 PAX8Q06710 450 aa11.18□□□□□ -0.62
HMGB3-204ENST00000448905 AQP6Q13520 282 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms