RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 BTN2A1Q7KYR7 527 aa2.56□□□□□ -2
PMS1-215ENST00000447232 CENPVQ7Z7K6 275 aaPredicted RBP2.56□□□□□ -2
PMS1-215ENST00000447232 LYSMD2Q8IV50 215 aa2.56□□□□□ -2
PMS1-215ENST00000447232 LRRC8AQ8IWT6 810 aa2.56□□□□□ -2
PMS1-215ENST00000447232 OR4F6Q8NGB9 312 aa2.56□□□□□ -2
PMS1-215ENST00000447232 OR52H1Q8NGJ2 320 aa2.56□□□□□ -2
PMS1-215ENST00000447232 DCAKDQ8WVC6 231 aa2.56□□□□□ -2
PMS1-215ENST00000447232 APIPQ96GX9 242 aa2.56□□□□□ -2
PMS1-215ENST00000447232 PITX2Q99697 317 aa2.56□□□□□ -2
PMS1-215ENST00000447232 PTDSS2Q9BVG9 487 aa2.56□□□□□ -2
PMS1-215ENST00000447232 EXOSC3Q9NQT5 275 aaKnown RBP2.56□□□□□ -2
PMS1-215ENST00000447232 NANSQ9NR45 359 aa2.56□□□□□ -2
PMS1-215ENST00000447232 TCF19Q9Y242 345 aa2.56□□□□□ -2
PMS1-215ENST00000447232 POFUT2Q9Y2G5 429 aa2.56□□□□□ -2
PMS1-215ENST00000447232 MTO1Q9Y2Z2 717 aaKnown RBP2.56□□□□□ -2
PMS1-215ENST00000447232 LOC102725191A0A1B0GVB3 256 aa2.56□□□□□ -2
PMS1-215ENST00000447232 SEC14L6B5MCN3 397 aa2.56□□□□□ -2
PMS1-215ENST00000447232 FAAHO00519 579 aa2.56□□□□□ -2
PMS1-215ENST00000447232 HDAC3O15379 428 aa2.56□□□□□ -2
PMS1-215ENST00000447232 CRCPO75575 148 aa2.56□□□□□ -2
PMS1-215ENST00000447232 PTHP01270 115 aa2.56□□□□□ -2
PMS1-215ENST00000447232 ANXA4P09525 319 aaPredicted RBP2.56□□□□□ -2
PMS1-215ENST00000447232 PNMTP11086 282 aa2.56□□□□□ -2
PMS1-215ENST00000447232 AHCYP23526 432 aa2.56□□□□□ -2
PMS1-215ENST00000447232 PAX6P26367 422 aa2.56□□□□□ -2
PMS1-215ENST00000447232 ACAA2P42765 397 aaKnown RBP2.56□□□□□ -2
PMS1-215ENST00000447232 CCT3P49368 545 aaKnown RBP2.56□□□□□ -2
PMS1-215ENST00000447232 SLC12A2P55011 1212 aa2.56□□□□□ -2
PMS1-215ENST00000447232 SELPLGQ14242 412 aa2.56□□□□□ -2
PMS1-215ENST00000447232 LASP1Q14847 261 aaKnown RBP2.56□□□□□ -2
PMS1-215ENST00000447232 CHI3L2Q15782 390 aa2.56□□□□□ -2
PMS1-215ENST00000447232 MAPK14Q16539 360 aa2.56□□□□□ -2
PMS1-215ENST00000447232 KHDC1LQ5JSQ8 128 aa2.56□□□□□ -2
PMS1-215ENST00000447232 HCP5Q6MZN7 132 aa2.56□□□□□ -2
PMS1-215ENST00000447232 C16orf89Q6UX73 402 aa2.56□□□□□ -2
PMS1-215ENST00000447232 OR2W3Q7Z3T1 314 aa2.56□□□□□ -2
PMS1-215ENST00000447232 DPPA2Q7Z7J5 298 aa2.56□□□□□ -2
PMS1-215ENST00000447232 ZER1Q7Z7L7 766 aa2.56□□□□□ -2
PMS1-215ENST00000447232 SLC22A24Q8N4F4 322 aa2.56□□□□□ -2
PMS1-215ENST00000447232 RHEBL1Q8TAI7 183 aa2.56□□□□□ -2
PMS1-215ENST00000447232 OIT3Q8WWZ8 545 aa2.56□□□□□ -2
PMS1-215ENST00000447232 FAM120BQ96EK7 910 aaKnown RBP2.56□□□□□ -2
PMS1-215ENST00000447232 ZNF764Q96H86 408 aaPredicted RBP2.56□□□□□ -2
PMS1-215ENST00000447232 POM121L2Q96KW2 1035 aa2.56□□□□□ -2
PMS1-215ENST00000447232 OXGR1Q96P68 337 aa2.56□□□□□ -2
PMS1-215ENST00000447232 ZNF347Q96SE7 839 aa2.56□□□□□ -2
PMS1-215ENST00000447232 SDF2Q99470 211 aa2.56□□□□□ -2
PMS1-215ENST00000447232 ACPTQ9BZG2 426 aa2.56□□□□□ -2
PMS1-215ENST00000447232 LRMDAQ9H2I8 198 aa2.56□□□□□ -2
PMS1-215ENST00000447232 AKIP1Q9NQ31 210 aa2.56□□□□□ -2
PMS1-215ENST00000447232 MIEF1Q9NQG6 463 aa2.56□□□□□ -2
PMS1-215ENST00000447232 MAN2C1Q9NTJ4 1040 aa2.56□□□□□ -2
PMS1-215ENST00000447232 MKS1Q9NXB0 559 aa2.56□□□□□ -2
PMS1-215ENST00000447232 ZNF225Q9UK10 706 aa2.56□□□□□ -2
PMS1-215ENST00000447232 TMCC3Q9ULS5 477 aa2.56□□□□□ -2
PMS1-215ENST00000447232 SLC35A3Q9Y2D2 325 aa2.56□□□□□ -2
PMS1-215ENST00000447232 IGLV1-36A0A0B4J1U3 117 aa2.55□□□□□ -2
PMS1-215ENST00000447232 TRIM64CA6NLI5 447 aa2.55□□□□□ -2
PMS1-215ENST00000447232 SYCE1LA8MT33 242 aa2.55□□□□□ -2
PMS1-215ENST00000447232 AP3D1O14617 1153 aa2.55□□□□□ -2
PMS1-215ENST00000447232 TIMM8AO60220 97 aaPredicted RBP2.55□□□□□ -2
PMS1-215ENST00000447232 SCN2BO60939 215 aa2.55□□□□□ -2
PMS1-215ENST00000447232 SNRNP70P08621 437 aaKnown RBP2.55□□□□□ -2
PMS1-215ENST00000447232 MMP7P09237 267 aaPredicted RBP2.55□□□□□ -2
PMS1-215ENST00000447232 IGHV4-30-4P0DP06 118 aa2.55□□□□□ -2
PMS1-215ENST00000447232 GFAPP14136 432 aa2.55□□□□□ -2
PMS1-215ENST00000447232 STMN1P16949 149 aa2.55□□□□□ -2
PMS1-215ENST00000447232 KITLGP21583 273 aa2.55□□□□□ -2
PMS1-215ENST00000447232 PAICSP22234 425 aaKnown RBP2.55□□□□□ -2
PMS1-215ENST00000447232 FASP25445 335 aa2.55□□□□□ -2
PMS1-215ENST00000447232 ACSM2AQ08AH3 577 aa2.55□□□□□ -2
PMS1-215ENST00000447232 MGAT5Q09328 741 aa2.55□□□□□ -2
PMS1-215ENST00000447232 ILF2Q12905 390 aaKnown RBP2.55□□□□□ -2
PMS1-215ENST00000447232 C21orf62-AS1Q17RA5 79 aa2.55□□□□□ -2
PMS1-215ENST00000447232 SEL1L2Q5TEA6 688 aa2.55□□□□□ -2
PMS1-215ENST00000447232 RNLSQ5VYX0 342 aa2.55□□□□□ -2
PMS1-215ENST00000447232 ACSM2BQ68CK6 577 aa2.55□□□□□ -2
PMS1-215ENST00000447232 SZRD1Q7Z422 152 aa2.55□□□□□ -2
PMS1-215ENST00000447232 SNX32Q86XE0 403 aa2.55□□□□□ -2
PMS1-215ENST00000447232 C1orf87Q8N0U7 546 aa2.55□□□□□ -2
PMS1-215ENST00000447232 C19orf18Q8NEA5 215 aa2.55□□□□□ -2
PMS1-215ENST00000447232 SLC26A10Q8NG04 563 aa2.55□□□□□ -2
PMS1-215ENST00000447232 PNPT1Q8TCS8 783 aaKnown RBP2.55□□□□□ -2
PMS1-215ENST00000447232 GRK7Q8WTQ7 553 aa2.55□□□□□ -2
PMS1-215ENST00000447232 ATP6V1E2Q96A05 226 aa2.55□□□□□ -2
PMS1-215ENST00000447232 CIDECQ96AQ7 238 aaPredicted RBP2.55□□□□□ -2
PMS1-215ENST00000447232 RAX2Q96IS3 184 aa2.55□□□□□ -2
PMS1-215ENST00000447232 ZNF607Q96SK3 696 aa2.55□□□□□ -2
PMS1-215ENST00000447232 GPR22Q99680 433 aa2.55□□□□□ -2
PMS1-215ENST00000447232 TAPBPLQ9BX59 468 aa2.55□□□□□ -2
PMS1-215ENST00000447232 NMRAL1Q9HBL8 299 aa2.55□□□□□ -2
PMS1-215ENST00000447232 PCTPQ9UKL6 214 aa2.55□□□□□ -2
PMS1-215ENST00000447232 SNX6Q9UNH7 406 aa2.55□□□□□ -2
PMS1-215ENST00000447232 LYVE1Q9Y5Y7 322 aa2.55□□□□□ -2
PMS1-215ENST00000447232 LOC100509620A0A075B734 347 aa2.55□□□□□ -2
PMS1-215ENST00000447232 IQCMA0A1B0GVH7 501 aa2.55□□□□□ -2
PMS1-215ENST00000447232 GAGE12BA1L429 117 aa2.55□□□□□ -2
PMS1-215ENST00000447232 GAGE12HA6NDE8 117 aa2.55□□□□□ -2
PMS1-215ENST00000447232 LRRC30A6NM36 301 aa2.55□□□□□ -2
PMS1-215ENST00000447232 A8MVM7 634 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms