RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 FOSL1P15407 271 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 HTR5AP47898 357 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 EFNA4P52798 201 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 UCP2P55851 309 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 SCRN3Q0VDG4 424 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 AQP6Q13520 282 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 GK3PQ14409 553 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 ALKBH6Q3KRA9 238 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 ZNF362Q5T0B9 420 aaPredicted RBP12.74□□□□□ -0.37
HDAC4-204ENST00000446876 CORO6Q6QEF8 472 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 RFPL4BQ6ZWI9 263 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 VASH1Q7L8A9 365 aaPredicted RBP12.74□□□□□ -0.37
HDAC4-204ENST00000446876 SYT9Q86SS6 491 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 ALDH16A1Q8IZ83 802 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 LNX2Q8N448 690 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 SLC37A3Q8NCC5 494 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 SLC26A10Q8NG04 563 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 OR9Q1Q8NGQ5 310 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 OR1J1Q8NGS3 322 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 ZNRF4Q8WWF5 429 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 SLC7A6Q92536 515 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 UTP4Q969X6 686 aaKnown RBP12.74□□□□□ -0.37
HDAC4-204ENST00000446876 DDOQ99489 341 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 YY1AP1Q9H869 796 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 NTN4Q9HB63 628 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 REV1Q9UBZ9 1251 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 DUSP13Q9UII6 198 aa12.74□□□□□ -0.37
HDAC4-204ENST00000446876 A0A1W2PPW3 197 aa12.73□□□□□ -0.37
HDAC4-204ENST00000446876 H3BN98 237 aa12.73□□□□□ -0.37
HDAC4-204ENST00000446876 RER1O15258 196 aa12.73□□□□□ -0.37
HDAC4-204ENST00000446876 F12P00748 615 aaPredicted RBP12.73□□□□□ -0.37
HDAC4-204ENST00000446876 HOXB6P17509 224 aaKnown RBP12.73□□□□□ -0.37
HDAC4-204ENST00000446876 PCSK6P29122 969 aa12.73□□□□□ -0.37
HDAC4-204ENST00000446876 LSM6P62312 80 aaKnown RBP12.73□□□□□ -0.37
HDAC4-204ENST00000446876 GLO1Q04760 184 aa12.73□□□□□ -0.37
HDAC4-204ENST00000446876 CRMP1Q14194 572 aa12.73□□□□□ -0.37
HDAC4-204ENST00000446876 KCNMB1Q16558 191 aa12.73□□□□□ -0.37
HDAC4-204ENST00000446876 CCDC92Q53HC0 331 aaPredicted RBP12.73□□□□□ -0.37
HDAC4-204ENST00000446876 CLEC2AQ6UVW9 174 aa12.73□□□□□ -0.37
HDAC4-204ENST00000446876 LYPD4Q6UWN0 246 aa12.73□□□□□ -0.37
HDAC4-204ENST00000446876 CD300LDQ6UXZ3 194 aa12.73□□□□□ -0.37
HDAC4-204ENST00000446876 CCDC121Q6ZUS5 278 aa12.73□□□□□ -0.37
HDAC4-204ENST00000446876 ASRGL1Q7L266 308 aa12.73□□□□□ -0.37
HDAC4-204ENST00000446876 ZBTB46Q86UZ6 589 aa12.73□□□□□ -0.37
HDAC4-204ENST00000446876 LINC00346Q8IVM7 164 aa12.73□□□□□ -0.37
HDAC4-204ENST00000446876 OR2T33Q8NG76 320 aa12.73□□□□□ -0.37
HDAC4-204ENST00000446876 OR51L1Q8NGJ5 315 aa12.73□□□□□ -0.37
HDAC4-204ENST00000446876 TEX47Q8TBZ9 253 aa12.73□□□□□ -0.37
HDAC4-204ENST00000446876 BCL2L14Q9BZR8 327 aa12.73□□□□□ -0.37
HDAC4-204ENST00000446876 MMADHCQ9H3L0 296 aaPredicted RBP12.73□□□□□ -0.37
HDAC4-204ENST00000446876 PLEK2Q9NYT0 353 aa12.73□□□□□ -0.37
HDAC4-204ENST00000446876 FKBP7Q9Y680 259 aa12.73□□□□□ -0.37
HDAC4-204ENST00000446876 LHFPL6Q9Y693 200 aa12.73□□□□□ -0.37
HDAC4-204ENST00000446876 TVP23AA6NH52 213 aa12.72□□□□□ -0.37
HDAC4-204ENST00000446876 M0R233 179 aa12.72□□□□□ -0.37
HDAC4-204ENST00000446876 SYNGR3O43761 229 aa12.72□□□□□ -0.37
HDAC4-204ENST00000446876 NGFP01138 241 aa12.72□□□□□ -0.37
HDAC4-204ENST00000446876 HLA-DQA2P01906 255 aa12.72□□□□□ -0.37
HDAC4-204ENST00000446876 GYPBP06028 91 aa12.72□□□□□ -0.37
HDAC4-204ENST00000446876 POU1F1P28069 291 aa12.72□□□□□ -0.37
HDAC4-204ENST00000446876 MPV17P39210 176 aa12.72□□□□□ -0.37
HDAC4-204ENST00000446876 RAD52P43351 418 aa12.72□□□□□ -0.37
HDAC4-204ENST00000446876 TEKQ02763 1124 aa12.72□□□□□ -0.37
HDAC4-204ENST00000446876 CARTPTQ16568 116 aa12.72□□□□□ -0.37
HDAC4-204ENST00000446876 TMEM255AQ5JRV8 349 aa12.72□□□□□ -0.37
HDAC4-204ENST00000446876 PROKR2Q8NFJ6 384 aa12.72□□□□□ -0.37
HDAC4-204ENST00000446876 ABHD4Q8TB40 342 aa12.72□□□□□ -0.37
HDAC4-204ENST00000446876 SLC25A40Q8TBP6 338 aa12.72□□□□□ -0.37
HDAC4-204ENST00000446876 GTF3AQ92664 365 aaKnown RBP12.72□□□□□ -0.37
HDAC4-204ENST00000446876 REG4Q9BYZ8 158 aa12.72□□□□□ -0.37
HDAC4-204ENST00000446876 POFUT1Q9H488 388 aa12.72□□□□□ -0.37
HDAC4-204ENST00000446876 MRPL22Q9NWU5 206 aaKnown RBP12.72□□□□□ -0.37
HDAC4-204ENST00000446876 TAAR3PQ9P1P4 343 aa12.72□□□□□ -0.37
HDAC4-204ENST00000446876 EIF3KQ9UBQ5 218 aaKnown RBP12.72□□□□□ -0.37
HDAC4-204ENST00000446876 NDRG4Q9ULP0 352 aaKnown RBP12.72□□□□□ -0.37
HDAC4-204ENST00000446876 OR6C6A6NF89 314 aa12.71□□□□□ -0.37
HDAC4-204ENST00000446876 DEAF1O75398 565 aaPredicted RBP12.71□□□□□ -0.37
HDAC4-204ENST00000446876 CIB2O75838 187 aa12.71□□□□□ -0.37
HDAC4-204ENST00000446876 LY6G6DO95868 133 aa12.71□□□□□ -0.37
HDAC4-204ENST00000446876 DBHP09172 617 aa12.71□□□□□ -0.37
HDAC4-204ENST00000446876 CLUP10909 449 aa12.71□□□□□ -0.37
HDAC4-204ENST00000446876 NAT2P11245 290 aa12.71□□□□□ -0.37
HDAC4-204ENST00000446876 PSKH1P11801 424 aa12.71□□□□□ -0.37
HDAC4-204ENST00000446876 ZNF250P15622 560 aa12.71□□□□□ -0.37
HDAC4-204ENST00000446876 RPS27P42677 84 aaKnown RBP12.71□□□□□ -0.37
HDAC4-204ENST00000446876 EVX1P49640 407 aa12.71□□□□□ -0.37
HDAC4-204ENST00000446876 KLF3P57682 345 aaPredicted RBP12.71□□□□□ -0.37
HDAC4-204ENST00000446876 COX10Q12887 443 aa12.71□□□□□ -0.37
HDAC4-204ENST00000446876 NKPD1Q17RQ9 610 aa12.71□□□□□ -0.37
HDAC4-204ENST00000446876 TMEM154Q6P9G4 183 aa12.71□□□□□ -0.37
HDAC4-204ENST00000446876 SHQ1Q6PI26 577 aaKnown RBP12.71□□□□□ -0.37
HDAC4-204ENST00000446876 CLEC9AQ6UXN8 241 aa12.71□□□□□ -0.37
HDAC4-204ENST00000446876 CFAP77Q6ZQR2 320 aa12.71□□□□□ -0.37
HDAC4-204ENST00000446876 BIVMQ86UB2 503 aa12.71□□□□□ -0.37
HDAC4-204ENST00000446876 ATG16L2Q8NAA4 619 aa12.71□□□□□ -0.37
HDAC4-204ENST00000446876 OR10H5Q8NGA6 315 aa12.71□□□□□ -0.37
HDAC4-204ENST00000446876 OR1F12Q8NHA8 337 aa12.71□□□□□ -0.37
HDAC4-204ENST00000446876 SYNPRQ8TBG9 265 aa12.71□□□□□ -0.37
HDAC4-204ENST00000446876 C10orf105Q8TEF2 133 aa12.71□□□□□ -0.37
HDAC4-204ENST00000446876 FAM168AQ92567 244 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms