RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 RPS27AP62979 156 aaKnown RBP12.78□□□□□ -0.36
ERCC3-203ENST00000445889 UBA52P62987 128 aaKnown RBP12.78□□□□□ -0.36
ERCC3-203ENST00000445889 SRSF3P84103 164 aaKnown RBP12.78□□□□□ -0.36
ERCC3-203ENST00000445889 INSM1Q01101 510 aaPredicted RBP12.78□□□□□ -0.36
ERCC3-203ENST00000445889 FMODQ06828 376 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 RASGEF1BQ0VAM2 473 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 MPPED2Q15777 294 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 GLT8D1Q68CQ7 371 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 C16orf47Q6ZP98 133 aaPredicted RBP12.78□□□□□ -0.36
ERCC3-203ENST00000445889 RNF144BQ7Z419 303 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 OR4D6Q8NGJ1 314 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 ZBTB8AQ96BR9 441 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 OR8B4Q96RC9 309 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 ZNF768Q9H5H4 540 aaKnown RBP12.78□□□□□ -0.36
ERCC3-203ENST00000445889 CENPMQ9NSP4 180 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 GPN3Q9UHW5 284 aaPredicted RBP12.78□□□□□ -0.36
ERCC3-203ENST00000445889 PCDHB10Q9UN67 800 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 DOCK8Q8NF50 2099 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 WDPCPO95876 746 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 CTSEP14091 401 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 ACTBP60709 375 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 ACTG1P63261 375 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 ZNF117Q03924 483 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 PMPCAQ10713 525 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 PPP1R1AQ13522 171 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 C11orf87Q6NUJ2 197 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 TMPPEQ6ZT21 453 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 CBLN2Q8IUK8 224 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 TMEM151BQ8IW70 566 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 C19orf47Q8N9M1 422 aaKnown RBP12.78□□□□□ -0.36
ERCC3-203ENST00000445889 ROBO4Q8WZ75 1007 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 ABHD6Q9BV23 337 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 CST11Q9H112 138 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 UPB1Q9UBR1 384 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 COA3Q9Y2R0 106 aaPredicted RBP12.78□□□□□ -0.36
ERCC3-203ENST00000445889 BRWD1Q9NSI6 2320 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 NDUFA2O43678 99 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 PNMTP11086 282 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 ZP2Q05996 745 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 GUCA2BQ16661 112 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 TMEM17Q86X19 198 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 WDFY1Q8IWB7 410 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 ADAD2Q8NCV1 583 aaKnown RBP12.78□□□□□ -0.36
ERCC3-203ENST00000445889 SLC41A2Q96JW4 573 aa12.78□□□□□ -0.36
ERCC3-203ENST00000445889 ASXL3Q9C0F0 2248 aa12.77□□□□□ -0.36
ERCC3-203ENST00000445889 A0A0D9SG52 128 aa12.77□□□□□ -0.36
ERCC3-203ENST00000445889 A0A1W2PPC1 479 aa12.77□□□□□ -0.36
ERCC3-203ENST00000445889 WIPF3A6NGB9 483 aa12.77□□□□□ -0.36
ERCC3-203ENST00000445889 CLPSP04118 112 aa12.77□□□□□ -0.36
ERCC3-203ENST00000445889 BDKRB2P30411 391 aa12.77□□□□□ -0.36
ERCC3-203ENST00000445889 EGR3Q06889 387 aa12.77□□□□□ -0.36
ERCC3-203ENST00000445889 MOB3CQ70IA8 216 aa12.77□□□□□ -0.36
ERCC3-203ENST00000445889 SOHLH2Q9NX45 425 aa12.77□□□□□ -0.36
ERCC3-203ENST00000445889 EPHA6Q9UF33 1036 aa12.77□□□□□ -0.36
ERCC3-203ENST00000445889 MRPS33Q9Y291 106 aaKnown RBP12.77□□□□□ -0.36
ERCC3-203ENST00000445889 LRP12Q9Y561 859 aa12.77□□□□□ -0.36
ERCC3-203ENST00000445889 RNF222A6NCQ9 220 aa12.77□□□□□ -0.37
ERCC3-203ENST00000445889 FADS1O60427 444 aa12.77□□□□□ -0.37
ERCC3-203ENST00000445889 TNFP01375 233 aa12.77□□□□□ -0.37
ERCC3-203ENST00000445889 GP1BAP07359 652 aa12.77□□□□□ -0.37
ERCC3-203ENST00000445889 ZNF735P0CB33 412 aa12.77□□□□□ -0.37
ERCC3-203ENST00000445889 PI3P19957 117 aa12.77□□□□□ -0.37
ERCC3-203ENST00000445889 AGTR1P30556 359 aa12.77□□□□□ -0.37
ERCC3-203ENST00000445889 DNASE1L1P49184 302 aa12.77□□□□□ -0.37
ERCC3-203ENST00000445889 FUT7Q11130 342 aa12.77□□□□□ -0.37
ERCC3-203ENST00000445889 SNTB1Q13884 538 aaKnown RBP12.77□□□□□ -0.37
ERCC3-203ENST00000445889 ISXQ2M1V0 245 aa12.77□□□□□ -0.37
ERCC3-203ENST00000445889 CLVS2Q5SYC1 327 aa12.77□□□□□ -0.37
ERCC3-203ENST00000445889 ZNF679Q8IYX0 411 aa12.77□□□□□ -0.37
ERCC3-203ENST00000445889 ARHGEF39Q8N4T4 335 aa12.77□□□□□ -0.37
ERCC3-203ENST00000445889 KCNRGQ8N5I3 272 aa12.77□□□□□ -0.37
ERCC3-203ENST00000445889 OR5M8Q8NGP6 311 aa12.77□□□□□ -0.37
ERCC3-203ENST00000445889 OR13C3Q8NGS6 347 aa12.77□□□□□ -0.37
ERCC3-203ENST00000445889 MLXQ9UH92 298 aa12.77□□□□□ -0.37
ERCC3-203ENST00000445889 TNFSF18Q9UNG2 199 aa12.77□□□□□ -0.37
ERCC3-203ENST00000445889 A0A1B0GW55 424 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 CPED1A4D0V7 1026 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 OR2AT4A6NND4 320 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 P2RY10O00398 339 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 ZNF432O94892 652 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 OPN1LWP04000 364 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 DUX4L2P0CJ85 424 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 DUX4L3P0CJ86 424 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 DUX4L4P0CJ87 422 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 DUX4L5P0CJ88 424 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 DUX4L6P0CJ89 424 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 DUX4L7P0CJ90 424 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 GFERP55789 205 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 PPIAP62937 165 aaKnown RBP12.76□□□□□ -0.37
ERCC3-203ENST00000445889 RAB12Q6IQ22 244 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 SHISA6Q6ZSJ9 500 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 PUSL1Q8N0Z8 303 aaKnown RBP12.76□□□□□ -0.37
ERCC3-203ENST00000445889 PAQR8Q8TEZ7 354 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 PTPMT1Q8WUK0 201 aaPredicted RBP12.76□□□□□ -0.37
ERCC3-203ENST00000445889 SLC19A3Q9BZV2 496 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 DHCR7Q9UBM7 475 aaKnown RBP12.76□□□□□ -0.37
ERCC3-203ENST00000445889 DUX4Q9UBX2 424 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 PRSS37A4D1T9 235 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 H7C2Y5 167 aa12.76□□□□□ -0.37
ERCC3-203ENST00000445889 GNB3P16520 340 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms