RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 RPRD1BQ9NQG5 326 aaKnown RBP16.09■□□□□ 0.17
HDAC4-203ENST00000445704 IL20Q9NYY1 176 aa16.09■□□□□ 0.17
HDAC4-203ENST00000445704 ASH2LQ9UBL3 628 aa16.09■□□□□ 0.17
HDAC4-203ENST00000445704 POMPQ9Y244 141 aa16.09■□□□□ 0.17
HDAC4-203ENST00000445704 FN1P02751 2386 aaKnown RBP16.08■□□□□ 0.17
HDAC4-203ENST00000445704 NSD1Q96L73 2696 aaPredicted RBP16.08■□□□□ 0.16
HDAC4-203ENST00000445704 CHD3Q12873 2000 aaKnown RBP16.08■□□□□ 0.16
HDAC4-203ENST00000445704 LOC390937A0A1W2PQ73 354 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 SGCEO43556 437 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 IDH3BO43837 385 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 SOX14O95416 240 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 RENP00797 406 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 CST1P01037 141 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 NGFP01138 241 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 TP53P04637 393 aaPredicted RBP16.08■□□□□ 0.16
HDAC4-203ENST00000445704 ERCC1P07992 297 aaPredicted RBP16.08■□□□□ 0.16
HDAC4-203ENST00000445704 NAT2P11245 290 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 DAOP14920 347 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 NOS3P29474 1203 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 CRABP1P29762 137 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 CENPAP49450 140 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 ERFP50548 548 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 KLF3P57682 345 aaPredicted RBP16.08■□□□□ 0.16
HDAC4-203ENST00000445704 LSM6P62312 80 aaKnown RBP16.08■□□□□ 0.16
HDAC4-203ENST00000445704 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.08■□□□□ 0.16
HDAC4-203ENST00000445704 FLOT2Q14254 428 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 RPL13AP3Q6NVV1 102 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 DNM1P34Q6PK57 102 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.08■□□□□ 0.16
HDAC4-203ENST00000445704 TMEM179BQ7Z7N9 219 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 NPEPL1Q8NDH3 523 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 OR10G2Q8NGC3 310 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 OR52L1Q8NGH7 329 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 OR52E2Q8NGJ4 325 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 PIMREGQ9BSJ6 248 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 DGCR6LQ9BY27 220 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 RACGAP1Q9H0H5 632 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 MS4A5Q9H3V2 200 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 TBC1D23Q9NUY8 699 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 TAAR3PQ9P1P4 343 aa16.08■□□□□ 0.16
HDAC4-203ENST00000445704 ZFHX3Q15911 3703 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 INAFM1C9JVW0 142 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 LYNX1G3V0Z9 82 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 NDUFS8O00217 210 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 GSC2O15499 205 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 ICMTO60725 284 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 LYNX1P0DP58 116 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 COX5BP10606 129 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 MPV17P39210 176 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 NR4A2P43354 598 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 HTR5AP47898 357 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 GLO1Q04760 184 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 NKPD1Q17RQ9 610 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 CCDC92Q53HC0 331 aaPredicted RBP16.07■□□□□ 0.16
HDAC4-203ENST00000445704 ZNF362Q5T0B9 420 aaPredicted RBP16.07■□□□□ 0.16
HDAC4-203ENST00000445704 ZBTB46Q86UZ6 589 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 SPATA24Q86W54 205 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 SLC26A10Q8NG04 563 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 OR4Q3Q8NH05 313 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 ABHD4Q8TB40 342 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 SLC25A40Q8TBP6 338 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 SLC7A6Q92536 515 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 GTF3AQ92664 365 aaKnown RBP16.07■□□□□ 0.16
HDAC4-203ENST00000445704 MARS2Q96GW9 593 aaKnown RBP16.07■□□□□ 0.16
HDAC4-203ENST00000445704 C4orf45Q96LM5 186 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 DDOQ99489 341 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 NIPSNAP1Q9BPW8 284 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 PLEK2Q9NYT0 353 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 EIF3KQ9UBQ5 218 aaKnown RBP16.07■□□□□ 0.16
HDAC4-203ENST00000445704 NDRG4Q9ULP0 352 aaKnown RBP16.07■□□□□ 0.16
HDAC4-203ENST00000445704 LHFPL6Q9Y693 200 aa16.07■□□□□ 0.16
HDAC4-203ENST00000445704 TLN2Q9Y4G6 2542 aa16.06■□□□□ 0.16
HDAC4-203ENST00000445704 TCRBV3S1A0A5B6 114 aa16.06■□□□□ 0.16
HDAC4-203ENST00000445704 RER1O15258 196 aa16.06■□□□□ 0.16
HDAC4-203ENST00000445704 NCR1O76036 304 aa16.06■□□□□ 0.16
HDAC4-203ENST00000445704 TFP02787 698 aa16.06■□□□□ 0.16
HDAC4-203ENST00000445704 HPXP02790 462 aa16.06■□□□□ 0.16
HDAC4-203ENST00000445704 PPP1CBP62140 327 aa16.06■□□□□ 0.16
HDAC4-203ENST00000445704 GGTLC2Q14390 218 aa16.06■□□□□ 0.16
HDAC4-203ENST00000445704 TMEM249Q2WGJ8 235 aa16.06■□□□□ 0.16
HDAC4-203ENST00000445704 ELFN2Q5R3F8 820 aa16.06■□□□□ 0.16
HDAC4-203ENST00000445704 ZNF786Q8N393 782 aa16.06■□□□□ 0.16
HDAC4-203ENST00000445704 CYB561A3Q8NBI2 242 aa16.06■□□□□ 0.16
HDAC4-203ENST00000445704 UBASH3BQ8TF42 649 aa16.06■□□□□ 0.16
HDAC4-203ENST00000445704 IPCEF1Q8WWN9 437 aaPredicted RBP16.06■□□□□ 0.16
HDAC4-203ENST00000445704 TSSK6Q9BXA6 273 aa16.06■□□□□ 0.16
HDAC4-203ENST00000445704 OR2J1Q9GZK6 312 aa16.06■□□□□ 0.16
HDAC4-203ENST00000445704 BPESC1Q9GZL8 116 aa16.06■□□□□ 0.16
HDAC4-203ENST00000445704 ARMC1Q9NVT9 282 aa16.06■□□□□ 0.16
HDAC4-203ENST00000445704 POLR1DQ9Y2S0 133 aa16.06■□□□□ 0.16
HDAC4-203ENST00000445704 IGHV4-61A0A0C4DH41 118 aa16.05■□□□□ 0.16
HDAC4-203ENST00000445704 OR6C6A6NF89 314 aa16.05■□□□□ 0.16
HDAC4-203ENST00000445704 CD5LO43866 347 aa16.05■□□□□ 0.16
HDAC4-203ENST00000445704 FKBP6O75344 327 aa16.05■□□□□ 0.16
HDAC4-203ENST00000445704 IGHV3-13P01766 116 aa16.05■□□□□ 0.16
HDAC4-203ENST00000445704 GSTM3P21266 225 aa16.05■□□□□ 0.16
HDAC4-203ENST00000445704 USF1P22415 310 aaPredicted RBP16.05■□□□□ 0.16
HDAC4-203ENST00000445704 MAGEB1P43366 347 aa16.05■□□□□ 0.16
HDAC4-203ENST00000445704 HIST1H3AP68431 136 aa16.05■□□□□ 0.16
HDAC4-203ENST00000445704 HIST2H3PS2Q5TEC6 136 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms