RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 FADS6Q8N9I5 356 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 ZBTB44Q8NCP5 570 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 OR10H4Q8NGA5 316 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 STAG3L4Q8TBR4 150 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 TWIST2Q8WVJ9 160 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 ROPN1LQ96C74 230 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 ASB9Q96DX5 294 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 C4orf36Q96KX1 117 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 IL4I1Q96RQ9 567 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 TSC22D3Q99576 134 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 GPA33Q99795 319 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 CCT7Q99832 543 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 GSDMCQ9BYG8 508 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 YIPF3Q9GZM5 350 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 DERL2Q9GZP9 239 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 CWH43Q9H720 699 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 ISG20L2Q9H9L3 353 aaKnown RBP3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 NLE1Q9NVX2 485 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 GID8Q9NWU2 228 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 HPF1Q9NWY4 346 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 MARCH5Q9NX47 278 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 ADA2Q9NZK5 511 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 LSM7Q9UK45 103 aaKnown RBP3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 RAB26Q9ULW5 256 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 GSTK1Q9Y2Q3 226 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 NDUFAF1Q9Y375 327 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 ARL5AQ9Y689 179 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 ANKRD36A6QL64 1941 aa3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 TDRD6O60522 2096 aaKnown RBP3.12□□□□□ -1.91
HMGB3P6-201ENST00000444896 TANC1Q9C0D5 1861 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 C15orf38-AP3S2A0A0A6YYH1 394 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 PPIAL4CA0A0B4J2A2 164 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 A0A0J9YYE9 177 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 SMIM31A0A1B0GVY4 71 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 FAM231BA6NCW3 169 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 OR51F1A6NGY5 319 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 H0YJX3 145 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 H3BMQ9 156 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 UBXN8O00124 270 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 CCL22O00626 93 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 TNFAIP8O95379 198 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 CSF2P04141 144 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 KRT6BP04259 564 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 FGF4P08620 206 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 RPS17P08708 135 aaKnown RBP3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 PPIAL4GP0DN37 164 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 CALCBP10092 127 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 ZNF7P17097 686 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 ATF6P18850 670 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 ELK1P19419 428 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 CD9P21926 228 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 PAX7P23759 505 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 HTR2AP28223 471 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 PEX19P40855 299 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 KIR2DS2P43631 304 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 PSMD8P48556 350 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 KRT6CP48668 564 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 RGS4P49798 205 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 ERFP50548 548 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 CDKN2DP55273 166 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 PKNOX1P55347 436 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 C1QTNF8P60827 252 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 RHOAP61586 193 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 AP1S1P61966 158 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 EWSR1Q01844 656 aaKnown RBP eCLIP3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 TWF1Q12792 350 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 BNIP2Q12982 314 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 PDK3Q15120 406 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 AANATQ16613 207 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 LRRC36Q1X8D7 754 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 SFT2D3Q587I9 215 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 LPCAT4Q643R3 524 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 TPGS2Q68CL5 300 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 CLEC6AQ6EIG7 209 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 SULT1C3Q6IMI6 304 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 SLC8B1Q6J4K2 584 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 ACSM5Q6NUN0 579 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 DPY19L4Q7Z388 723 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 ARPINQ7Z6K5 226 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 ZNF573Q86YE8 665 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 Q8N7P7 452 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 OR4K2Q8NGD2 314 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 OR56A4Q8NGH8 313 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 OR52K2Q8NGK3 314 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 OR13C4Q8NGS5 318 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 ANKRD49Q8WVL7 239 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 PPWD1Q96BP3 646 aaKnown RBP3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 DCUN1D1Q96GG9 259 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 OR5B2Q96R09 309 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 TRIB3Q96RU7 358 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 CYP2S1Q96SQ9 504 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 NPAS2Q99743 824 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 HOPXQ9BPY8 73 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 MRPS26Q9BYN8 205 aaKnown RBP3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 CHIAQ9BZP6 476 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 TRIM4Q9C037 500 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 SUDS3Q9H7L9 328 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 VCX3AQ9NNX9 186 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 FANCFQ9NPI8 374 aa3.11□□□□□ -1.91
HMGB3P6-201ENST00000444896 C8orf4Q9NR00 106 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms