RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 MED20Q9H944 212 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 ELOVL3Q9HB03 270 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 NOX3Q9HBY0 568 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 ATPIF1Q9UII2 106 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 ST6GALNAC2Q9UJ37 374 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 CENPEQ02224 2701 aa12.23□□□□□ -0.45
SSBP3-208ENST00000444533 OR6C6A6NF89 314 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 TVP23AA6NH52 213 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 SLC22A31A6NKX4 558 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 SNTNA6NMZ2 147 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 SNAP29O95721 258 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 GPANK1O95872 356 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 CLUP10909 449 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 KRTAP10-9P60411 292 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 SNTB2Q13425 540 aaKnown RBP12.22□□□□□ -0.45
SSBP3-208ENST00000444533 RAB35Q15286 201 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 TAF13Q15543 124 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 ZIK1Q3SY52 487 aaPredicted RBP12.22□□□□□ -0.45
SSBP3-208ENST00000444533 C12orf73Q69YU5 71 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 ZNF774Q6NX45 483 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 ERI1Q8IV48 349 aaKnown RBP12.22□□□□□ -0.45
SSBP3-208ENST00000444533 MUC15Q8N387 334 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 TCEANCQ8N8B7 351 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 OR8J1Q8NGP2 316 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 FAM81AQ8TBF8 368 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 TMEM163Q8TC26 289 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 TRUB1Q8WWH5 349 aaKnown RBP12.22□□□□□ -0.45
SSBP3-208ENST00000444533 PTP4A1Q93096 173 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 RFKQ969G6 155 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 COG8Q96MW5 612 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 WNT5BQ9H1J7 359 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 TOR3AQ9H497 397 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 HINT3Q9NQE9 182 aaKnown RBP12.22□□□□□ -0.45
SSBP3-208ENST00000444533 CA10Q9NS85 328 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 SMPD3Q9NY59 655 aaPredicted RBP12.22□□□□□ -0.45
SSBP3-208ENST00000444533 CMAHPQ9Y471 501 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 GMPPBQ9Y5P6 360 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 COMMD3-BMI1R4GMX3 469 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 ABCA4P78363 2273 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 CACNA1DQ01668 2161 aa12.22□□□□□ -0.45
SSBP3-208ENST00000444533 CELSR2Q9HCU4 2923 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 ZNF593O00488 134 aaPredicted RBP12.21□□□□□ -0.45
SSBP3-208ENST00000444533 RER1O15258 196 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 PRKYO43930 277 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 MPZL2O60487 215 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 ABHD16AO95870 558 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 TFP02787 698 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 SCG5P05408 212 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 LCKP06239 509 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 ZNF35P13682 527 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 NR4A1P22736 598 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 PCSK6P29122 969 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 CALCRP30988 508 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 SLC15A1P46059 708 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 SLC34A1Q06495 639 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 APOFQ13790 326 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 ELFN2Q5R3F8 820 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 NXNL2Q5VZ03 156 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 TMEM154Q6P9G4 183 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 VASH1Q7L8A9 365 aaPredicted RBP12.21□□□□□ -0.45
SSBP3-208ENST00000444533 ZNF584Q8IVC4 421 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 LINC00346Q8IVM7 164 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 GALNT4Q8N4A0 578 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 ZNF511Q8NB15 262 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 CPEB3Q8NE35 698 aaKnown RBP12.21□□□□□ -0.45
SSBP3-208ENST00000444533 OR6N2Q8NGY6 317 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 OR1F12Q8NHA8 337 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 SPTSSAQ969W0 71 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 HRASLS5Q96KN8 279 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 ZNF75AQ96N20 296 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 IL4I1Q96RQ9 567 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 DCLRE1CQ96SD1 692 aaKnown RBP12.21□□□□□ -0.45
SSBP3-208ENST00000444533 COQ7Q99807 217 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 APOL4Q9BPW4 351 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 HEATR1Q9H583 2144 aaKnown RBP12.21□□□□□ -0.45
SSBP3-208ENST00000444533 ZNF442Q9H7R0 627 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 CYB5R1Q9UHQ9 305 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 GPR160Q9UJ42 338 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 GDF2Q9UK05 429 aaPredicted RBP12.21□□□□□ -0.45
SSBP3-208ENST00000444533 LAMP3Q9UQV4 416 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 PLEKHA6Q9Y2H5 1048 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 PMF1-BGLAPU3KQ54 211 aa12.21□□□□□ -0.45
SSBP3-208ENST00000444533 A0A1W2PPR1 153 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 E7EQL1 145 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 SMPD2O60906 423 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 ERCC1P07992 297 aaPredicted RBP12.2□□□□□ -0.46
SSBP3-208ENST00000444533 CCL2P13500 99 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 EPHA2P29317 976 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 TTKP33981 857 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 GGT2P36268 569 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 ATP6V1E1P36543 226 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 POLR2IP36954 125 aaKnown RBP12.2□□□□□ -0.46
SSBP3-208ENST00000444533 SERPINF1P36955 418 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 RGS6P49758 472 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 NUDT6P53370 316 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 UCP2P55851 309 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 SNRPD2P62316 118 aaKnown RBP12.2□□□□□ -0.46
SSBP3-208ENST00000444533 MOGQ16653 247 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 TEX30Q5JUR7 227 aa12.2□□□□□ -0.46
SSBP3-208ENST00000444533 RGS7BPQ6MZT1 257 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms