RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 ACHEP22303 614 aa9.26□□□□□ -0.93
SF3A1-203ENST00000444440 SDHAP31040 664 aa9.26□□□□□ -0.93
SF3A1-203ENST00000444440 CDKN2AP42771 156 aaKnown RBP9.26□□□□□ -0.93
SF3A1-203ENST00000444440 RAD52P43351 418 aa9.26□□□□□ -0.93
SF3A1-203ENST00000444440 GDI2P50395 445 aaKnown RBP9.26□□□□□ -0.93
SF3A1-203ENST00000444440 MMP15P51511 669 aa9.26□□□□□ -0.93
SF3A1-203ENST00000444440 CHN2P52757 468 aa9.26□□□□□ -0.93
SF3A1-203ENST00000444440 SPIBQ01892 262 aa9.26□□□□□ -0.93
SF3A1-203ENST00000444440 CR1LQ2VPA4 569 aa9.26□□□□□ -0.93
SF3A1-203ENST00000444440 FAM98BQ52LJ0 330 aaKnown RBP9.26□□□□□ -0.93
SF3A1-203ENST00000444440 CYP2R1Q6VVX0 501 aa9.26□□□□□ -0.93
SF3A1-203ENST00000444440 ZER1Q7Z7L7 766 aa9.26□□□□□ -0.93
SF3A1-203ENST00000444440 ZNF540Q8NDQ6 660 aa9.26□□□□□ -0.93
SF3A1-203ENST00000444440 OR1J2Q8NGS2 313 aa9.26□□□□□ -0.93
SF3A1-203ENST00000444440 RDH5Q92781 318 aa9.26□□□□□ -0.93
SF3A1-203ENST00000444440 THTPAQ9BU02 230 aa9.26□□□□□ -0.93
SF3A1-203ENST00000444440 BEX2Q9BXY8 128 aa9.26□□□□□ -0.93
SF3A1-203ENST00000444440 BCL2L14Q9BZR8 327 aa9.26□□□□□ -0.93
SF3A1-203ENST00000444440 TRIM15Q9C019 465 aa9.26□□□□□ -0.93
SF3A1-203ENST00000444440 SYT4Q9H2B2 425 aa9.26□□□□□ -0.93
SF3A1-203ENST00000444440 MAGIXQ9H6Y5 334 aa9.26□□□□□ -0.93
SF3A1-203ENST00000444440 HINT3Q9NQE9 182 aaKnown RBP9.26□□□□□ -0.93
SF3A1-203ENST00000444440 KCNS2Q9ULS6 477 aa9.26□□□□□ -0.93
SF3A1-203ENST00000444440 COA3Q9Y2R0 106 aaPredicted RBP9.26□□□□□ -0.93
SF3A1-203ENST00000444440 IER3IP1Q9Y5U9 82 aa9.26□□□□□ -0.93
SF3A1-203ENST00000444440 UNC119BA6NIH7 251 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 XKRYO14609 159 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 AHCYL1O43865 530 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 DOK2O60496 412 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 SLC16A7O60669 478 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 ICMTO60725 284 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 UBOX5O94941 541 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 IGHV1-46P01743 117 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 HOXB6P17509 224 aaKnown RBP9.25□□□□□ -0.93
SF3A1-203ENST00000444440 RRM2P31350 389 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 GPR6P46095 362 aaPredicted RBP9.25□□□□□ -0.93
SF3A1-203ENST00000444440 ERFP50548 548 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 RASSF2P50749 326 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 CDH15P55291 814 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 PPP1CBP62140 327 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 TRAP1Q12931 704 aaKnown RBP9.25□□□□□ -0.93
SF3A1-203ENST00000444440 TSTQ16762 297 aaKnown RBP9.25□□□□□ -0.93
SF3A1-203ENST00000444440 MEP1BQ16820 701 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 DNAL1Q4LDG9 190 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 CCDC92Q53HC0 331 aaPredicted RBP9.25□□□□□ -0.93
SF3A1-203ENST00000444440 AVPI1Q5T686 147 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 MBNL2Q5VZF2 373 aaKnown RBP9.25□□□□□ -0.93
SF3A1-203ENST00000444440 LCN8Q6JVE9 175 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 VASH1Q7L8A9 365 aaPredicted RBP9.25□□□□□ -0.93
SF3A1-203ENST00000444440 PHC2Q8IXK0 858 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 LINC00471Q8N535 108 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 ABHD4Q8TB40 342 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 KLF14Q8TD94 323 aaPredicted RBP9.25□□□□□ -0.93
SF3A1-203ENST00000444440 C11orf40Q8WZ69 217 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 ASB9Q96DX5 294 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 NUAK2Q9H093 628 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 SHARPINQ9H0F6 387 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 FN3KQ9H479 309 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 DCAF16Q9NXF7 216 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 TREM2Q9NZC2 230 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 VSX1Q9NZR4 365 aaPredicted RBP9.25□□□□□ -0.93
SF3A1-203ENST00000444440 TIMM10BQ9Y5J6 103 aa9.25□□□□□ -0.93
SF3A1-203ENST00000444440 IGLV1-36A0A0B4J1U3 117 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 TCRBV5S2A0A599 114 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 PHF1O43189 567 aaPredicted RBP9.24□□□□□ -0.93
SF3A1-203ENST00000444440 PPIHO43447 177 aaKnown RBP9.24□□□□□ -0.93
SF3A1-203ENST00000444440 OR10H3O60404 316 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 ATP5HO75947 161 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 TXNDC12O95881 172 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 DBHP09172 617 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 GAAP10253 952 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 HTR5AP47898 357 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 HMGA2P52926 109 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 LMO4P61968 165 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 PPP1R8Q12972 351 aaKnown RBP9.24□□□□□ -0.93
SF3A1-203ENST00000444440 PSG7Q13046 419 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 GPR139Q6DWJ6 353 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 SMARCD3Q6STE5 483 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 DPY19L2P2Q6ZN68 376 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 Q6ZR03 302 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 USP51Q70EK9 711 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 SYT9Q86SS6 491 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 LINC01356Q8N9X3 169 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 FANK1Q8TC84 345 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 GNPDA2Q8TDQ7 276 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 HPS1Q92902 700 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 C4orf45Q96LM5 186 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 BTBD10Q9BSF8 475 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 LRMDAQ9H2I8 198 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 OR52D1Q9H346 318 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 RERGLQ9H628 205 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 LPAR2Q9HBW0 351 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 VNN3Q9NY84 501 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 SLCO1C1Q9NYB5 712 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 KLHL21Q9UJP4 597 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 LHFPL6Q9Y693 200 aa9.24□□□□□ -0.93
SF3A1-203ENST00000444440 IGHV1-69-2A0A0G2JMI3 117 aa9.23□□□□□ -0.93
SF3A1-203ENST00000444440 OR6C6A6NF89 314 aa9.23□□□□□ -0.93
SF3A1-203ENST00000444440 C12orf71A8MTZ7 269 aa9.23□□□□□ -0.93
SF3A1-203ENST00000444440 TNFRSF11BO00300 401 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms