RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 CRMP1Q14194 572 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 TBCEQ15813 527 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 HSPB2Q16082 182 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 HIST3H3Q16695 136 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 NADK2Q4G0N4 442 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 MESTQ5EB52 335 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 ZNF362Q5T0B9 420 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 NSUN5P2Q63ZY6 315 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 PLBD1Q6P4A8 553 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 LEG1Q6P5S2 330 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 ZNF773Q6PK81 442 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 Q6ZPB1 254 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 RHOUQ7L0Q8 258 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 MEPCEQ7L2J0 689 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 P4HA3Q7Z4N8 544 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 DPPA2Q7Z7J5 298 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 MEX3DQ86XN8 651 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 CPOQ8IVL8 374 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 STX19Q8N4C7 294 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 Q8NA96 180 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 ZNF540Q8NDQ6 660 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 SDR9C7Q8NEX9 313 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 TSPAN14Q8NG11 270 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 OR4K13Q8NH42 304 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 SVIPQ8NHG7 77 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 CNIH3Q8TBE1 160 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 FAM57AQ8TBR7 257 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 APH1BQ8WW43 257 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 Q96M85 177 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 ZNF582Q96NG8 517 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 TRIB1Q96RU8 372 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 DDOQ99489 341 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 VKORC1Q9BQB6 163 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 COPS4Q9BT78 406 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 CDCA4Q9BXL8 241 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 MRPL13Q9BYD1 178 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 SRXN1Q9BYN0 137 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 MRPS26Q9BYN8 205 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 MOV10Q9HCE1 1003 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 ZNF71Q9NQZ8 489 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 FKBP14Q9NWM8 211 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 UBAP1Q9NZ09 502 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 SPRR3Q9UBC9 169 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 IL20RAQ9UHF4 553 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 PSORS1C1Q9UIG5 152 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 ZNF346Q9UL40 294 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 DIMT1Q9UNQ2 313 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 NOSIPQ9Y314 301 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 EXOSC1Q9Y3B2 195 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 LIPGQ9Y5X9 500 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 FLVCR1Q9Y5Y0 555 aa6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 NCOA6Q14686 2063 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-210ENST00000443537 SHANK1Q9Y566 2161 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 CACNA1CQ13936 2221 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 ARPC4-TTLL3A0A0A6YYG9 625 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 A0A1B0GTH9 108 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 SLC22A23A1A5C7 686 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 OR6C68A6NDL8 312 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 MBD3L4A6NDZ8 208 aaPredicted RBP6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 MBD3L3A6NE82 208 aaPredicted RBP6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 MBD3L5A6NJ08 208 aaPredicted RBP6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 SS18L1O75177 396 aaPredicted RBP6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 ENTPD6O75354 484 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 KHDRBS3O75525 346 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 TRMUO75648 421 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 NCR1O76036 304 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 RAB36O95755 333 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 ABHD16AO95870 558 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 CLPTM1O96005 669 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 CDK1P06493 297 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 IGFBP1P08833 259 aaPredicted RBP6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 RPSAP08865 295 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 OR2T7P0C7T2 308 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 SPI1P17947 270 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 NPR2P20594 1047 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 FMO3P31513 532 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 CSNK1A1P48729 337 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 ZNF84P51523 738 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 NR1H2P55055 460 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 UCP3P55916 312 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 CLDN17P56750 224 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 RPS7P62081 194 aaKnown RBP6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 ACTA2P62736 377 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 ACTG2P63267 376 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 SRYQ05066 204 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 ZNF91Q05481 1191 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 APOFQ13790 326 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 GXYLT1Q4G148 440 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 ACSF3Q4G176 576 aaPredicted RBP6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 KLHL12Q53G59 568 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 C10orf128Q5T292 105 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 NHLRC1Q6VVB1 395 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 SHFQ7M4L6 423 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 SSX8Q7RTT4 187 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 AAED1Q7RTV5 226 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 KCTD20Q7Z5Y7 419 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 IGFN1Q86VF2 1251 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 TMEM123Q8N131 208 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 GPR137CQ8N3F9 429 aa6.28□□□□□ -1.4
R3HDM1-210ENST00000443537 ACBD7Q8N6N7 88 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms