RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 PDCD1Q15116 288 aa12.01□□□□□ -0.49
HMGN1-208ENST00000443046 SGCAQ16586 387 aa12.01□□□□□ -0.49
HMGN1-208ENST00000443046 FOXL2NBQ6ZUU3 175 aa12.01□□□□□ -0.49
HMGN1-208ENST00000443046 ALDH16A1Q8IZ83 802 aa12.01□□□□□ -0.49
HMGN1-208ENST00000443046 FITM2Q8N6M3 262 aa12.01□□□□□ -0.49
HMGN1-208ENST00000443046 LINC01006Q8NI28 216 aa12.01□□□□□ -0.49
HMGN1-208ENST00000443046 LIPHQ8WWY8 451 aa12.01□□□□□ -0.49
HMGN1-208ENST00000443046 HDAC2Q92769 488 aaKnown RBP12.01□□□□□ -0.49
HMGN1-208ENST00000443046 UBE2FQ969M7 185 aa12.01□□□□□ -0.49
HMGN1-208ENST00000443046 TBCCD1Q9NVR7 557 aa12.01□□□□□ -0.49
HMGN1-208ENST00000443046 MIOXQ9UGB7 285 aa12.01□□□□□ -0.49
HMGN1-208ENST00000443046 SLC7A7Q9UM01 511 aa12.01□□□□□ -0.49
HMGN1-208ENST00000443046 RNF114Q9Y508 228 aa12.01□□□□□ -0.49
HMGN1-208ENST00000443046 TIMM10BQ9Y5J6 103 aa12.01□□□□□ -0.49
HMGN1-208ENST00000443046 TRAPPC13A5PLN9 417 aa12□□□□□ -0.49
HMGN1-208ENST00000443046 MCIDASD6RGH6 385 aa12□□□□□ -0.49
HMGN1-208ENST00000443046 RGS16O15492 202 aaPredicted RBP12□□□□□ -0.49
HMGN1-208ENST00000443046 ERLIN1O75477 346 aa12□□□□□ -0.49
HMGN1-208ENST00000443046 TSPAN15O95858 294 aa12□□□□□ -0.49
HMGN1-208ENST00000443046 IGF2P01344 180 aa12□□□□□ -0.49
HMGN1-208ENST00000443046 THRBP10828 461 aa12□□□□□ -0.49
HMGN1-208ENST00000443046 UMPSP11172 480 aa12□□□□□ -0.49
HMGN1-208ENST00000443046 RPS2P15880 293 aaKnown RBP12□□□□□ -0.49
HMGN1-208ENST00000443046 LAP3P28838 519 aa12□□□□□ -0.49
HMGN1-208ENST00000443046 WDR4P57081 412 aaKnown RBP12□□□□□ -0.49
HMGN1-208ENST00000443046 GNB2P62879 340 aa12□□□□□ -0.49
HMGN1-208ENST00000443046 KRT71Q3SY84 523 aa12□□□□□ -0.49
HMGN1-208ENST00000443046 PAGE3Q5JUK9 113 aa12□□□□□ -0.49
HMGN1-208ENST00000443046 BLOC1S3Q6QNY0 202 aa12□□□□□ -0.49
HMGN1-208ENST00000443046 ZNF620Q6ZNG0 422 aa12□□□□□ -0.49
HMGN1-208ENST00000443046 PTOV1Q86YD1 416 aa12□□□□□ -0.49
HMGN1-208ENST00000443046 NPEPL1Q8NDH3 523 aa12□□□□□ -0.49
HMGN1-208ENST00000443046 VANGL1Q8TAA9 524 aaPredicted RBP12□□□□□ -0.49
HMGN1-208ENST00000443046 HAVCR1Q96D42 359 aa12□□□□□ -0.49
HMGN1-208ENST00000443046 FAM71F1Q96KD3 344 aaPredicted RBP12□□□□□ -0.49
HMGN1-208ENST00000443046 OR2V2Q96R30 315 aa12□□□□□ -0.49
HMGN1-208ENST00000443046 TMEM246Q9BRR3 403 aa12□□□□□ -0.49
HMGN1-208ENST00000443046 INIPQ9NRY2 104 aa12□□□□□ -0.49
HMGN1-208ENST00000443046 TNFRSF19Q9NS68 423 aa12□□□□□ -0.49
HMGN1-208ENST00000443046 STX18Q9P2W9 335 aaKnown RBP12□□□□□ -0.49
HMGN1-208ENST00000443046 TNFRSF13BO14836 293 aaPredicted RBP11.99□□□□□ -0.49
HMGN1-208ENST00000443046 SURF4O15260 269 aa11.99□□□□□ -0.49
HMGN1-208ENST00000443046 ALX3O95076 343 aa11.99□□□□□ -0.49
HMGN1-208ENST00000443046 MT-ND1P03886 318 aa11.99□□□□□ -0.49
HMGN1-208ENST00000443046 COX5BP10606 129 aa11.99□□□□□ -0.49
HMGN1-208ENST00000443046 FUT1P19526 365 aa11.99□□□□□ -0.49
HMGN1-208ENST00000443046 GSTM3P21266 225 aa11.99□□□□□ -0.49
HMGN1-208ENST00000443046 AQP2P41181 271 aa11.99□□□□□ -0.49
HMGN1-208ENST00000443046 FGF12P61328 243 aa11.99□□□□□ -0.49
HMGN1-208ENST00000443046 ENDOGQ14249 297 aaKnown RBP11.99□□□□□ -0.49
HMGN1-208ENST00000443046 TAF11Q15544 211 aa11.99□□□□□ -0.49
HMGN1-208ENST00000443046 ZNF404Q494X3 552 aa11.99□□□□□ -0.49
HMGN1-208ENST00000443046 SLC27A4Q6P1M0 643 aa11.99□□□□□ -0.49
HMGN1-208ENST00000443046 ARL9Q6T311 187 aa11.99□□□□□ -0.49
HMGN1-208ENST00000443046 SYT9Q86SS6 491 aa11.99□□□□□ -0.49
HMGN1-208ENST00000443046 MOSPD2Q8NHP6 518 aa11.99□□□□□ -0.49
HMGN1-208ENST00000443046 DYRK2Q92630 601 aa11.99□□□□□ -0.49
HMGN1-208ENST00000443046 NSMAFQ92636 917 aa11.99□□□□□ -0.49
HMGN1-208ENST00000443046 CMBLQ96DG6 245 aa11.99□□□□□ -0.49
HMGN1-208ENST00000443046 NEIL1Q96FI4 390 aaPredicted RBP11.99□□□□□ -0.49
HMGN1-208ENST00000443046 PLEKHA8Q96JA3 519 aa11.99□□□□□ -0.49
HMGN1-208ENST00000443046 NUDT16L1Q9BRJ7 211 aaKnown RBP11.99□□□□□ -0.49
HMGN1-208ENST00000443046 CORO2BQ9UQ03 480 aa11.99□□□□□ -0.49
HMGN1-208ENST00000443046 ANGPT4Q9Y264 503 aa11.99□□□□□ -0.49
HMGN1-208ENST00000443046 GMNCA6NCL1 334 aa11.98□□□□□ -0.49
HMGN1-208ENST00000443046 M0QX08 132 aa11.98□□□□□ -0.49
HMGN1-208ENST00000443046 OR7A10O76100 309 aa11.98□□□□□ -0.49
HMGN1-208ENST00000443046 ABHD16AO95870 558 aa11.98□□□□□ -0.49
HMGN1-208ENST00000443046 CD247P20963 164 aa11.98□□□□□ -0.49
HMGN1-208ENST00000443046 ERFP50548 548 aa11.98□□□□□ -0.49
HMGN1-208ENST00000443046 PCBD1P61457 104 aa11.98□□□□□ -0.49
HMGN1-208ENST00000443046 ZNF181Q2M3W8 571 aa11.98□□□□□ -0.49
HMGN1-208ENST00000443046 BEAN1Q3B7T3 259 aa11.98□□□□□ -0.49
HMGN1-208ENST00000443046 KPRPQ5T749 579 aaPredicted RBP11.98□□□□□ -0.49
HMGN1-208ENST00000443046 GPR157Q5UAW9 335 aa11.98□□□□□ -0.49
HMGN1-208ENST00000443046 ZNF841Q6ZN19 808 aa11.98□□□□□ -0.49
HMGN1-208ENST00000443046 MREGQ8N565 214 aa11.98□□□□□ -0.49
HMGN1-208ENST00000443046 SSMEM1Q8WWF3 244 aa11.98□□□□□ -0.49
HMGN1-208ENST00000443046 PAIP2Q9BPZ3 127 aaKnown RBP11.98□□□□□ -0.49
HMGN1-208ENST00000443046 SLC30A2Q9BRI3 323 aa11.98□□□□□ -0.49
HMGN1-208ENST00000443046 ALG12Q9BV10 488 aa11.98□□□□□ -0.49
HMGN1-208ENST00000443046 TXNIPQ9H3M7 391 aa11.98□□□□□ -0.49
HMGN1-208ENST00000443046 KCNK9Q9NPC2 374 aa11.98□□□□□ -0.49
HMGN1-208ENST00000443046 C20orf141Q9NUB4 165 aa11.98□□□□□ -0.49
HMGN1-208ENST00000443046 ASH2LQ9UBL3 628 aa11.98□□□□□ -0.49
HMGN1-208ENST00000443046 NDRG4Q9ULP0 352 aaKnown RBP11.98□□□□□ -0.49
HMGN1-208ENST00000443046 STARD10Q9Y365 291 aa11.98□□□□□ -0.49
HMGN1-208ENST00000443046 ZNF205O95201 554 aa11.97□□□□□ -0.49
HMGN1-208ENST00000443046 OPN1SWP03999 348 aa11.97□□□□□ -0.49
HMGN1-208ENST00000443046 SCG5P05408 212 aa11.97□□□□□ -0.49
HMGN1-208ENST00000443046 NR2C1P13056 603 aa11.97□□□□□ -0.49
HMGN1-208ENST00000443046 RUSC1-AS1Q66K80 236 aa11.97□□□□□ -0.49
HMGN1-208ENST00000443046 EPGNQ6UW88 154 aa11.97□□□□□ -0.49
HMGN1-208ENST00000443046 DLEU7Q6UYE1 221 aa11.97□□□□□ -0.49
HMGN1-208ENST00000443046 ZSCAN4Q8NAM6 433 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-208ENST00000443046 PFN4Q8NHR9 129 aa11.97□□□□□ -0.49
HMGN1-208ENST00000443046 ZNF420Q8TAQ5 688 aaPredicted RBP11.97□□□□□ -0.49
HMGN1-208ENST00000443046 PTP4A1Q93096 173 aa11.97□□□□□ -0.49
HMGN1-208ENST00000443046 SPDL1Q96EA4 605 aa11.97□□□□□ -0.49
HMGN1-208ENST00000443046 MAGEB18Q96M61 343 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms